RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	NSG2	Q9Y328	171 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	PUS1	Q9Y606	427 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	NKX2-6	A6NCS4	301 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	MARCH11	A6NNE9	402 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	FAM90A27P	A6NNH2	459 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	WNT9B	O14905	357 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	IFNA21	P01568	189 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	OR5AC1	P0C628	307 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	FABP4	P15090	132 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	GRN	P28799	593 aa	Known RBP	12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	GLIPR1	P48060	266 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	UBE2K	P61086	200 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	ANKRD55	Q3KP44	614 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318		Q6ZS49	121 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	SLC35E3	Q7Z769	313 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318		Q8WTZ3	238 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	RDH5	Q92781	318 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	SLC25A31	Q9H0C2	315 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	TAAR3P	Q9P1P4	343 aa		12.94	□□□□□ -0.34
DDX39A-209	ENST00000589318	HS3ST1	O14792	307 aa		12.93	□□□□□ -0.34
DDX39A-209	ENST00000589318	OR2H2	O95918	312 aa		12.93	□□□□□ -0.34
DDX39A-209	ENST00000589318	PRH1	P02810	166 aa		12.93	□□□□□ -0.34
DDX39A-209	ENST00000589318	NPY4R	P50391	375 aa		12.93	□□□□□ -0.34
DDX39A-209	ENST00000589318	SUPT4H1	P63272	117 aa	Known RBP	12.93	□□□□□ -0.34
DDX39A-209	ENST00000589318	RNASE6	Q93091	150 aa	Known RBP	12.93	□□□□□ -0.34
DDX39A-209	ENST00000589318	TVP23C	Q96ET8	276 aa		12.93	□□□□□ -0.34
DDX39A-209	ENST00000589318	ZNF286A	Q9HBT8	521 aa		12.93	□□□□□ -0.34
DDX39A-209	ENST00000589318	GSKIP	Q9P0R6	139 aa		12.93	□□□□□ -0.34
DDX39A-209	ENST00000589318	HIVEP3	Q5T1R4	2406 aa		12.93	□□□□□ -0.34
DDX39A-209	ENST00000589318		H3BQ15	152 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318		M0QZK8	103 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	SLC33A1	O00400	549 aa	Predicted RBP	12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	DEGS1	O15121	323 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	GPR137B	O60478	399 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	GGCT	O75223	188 aa	Known RBP	12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	METTL15P1	P0C7V9	234 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	MZT1	Q08AG7	82 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	ADIPOQ	Q15848	244 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	SRSF7	Q16629	238 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	SPIN3	Q5JUX0	258 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	C20orf204	Q6ZNR8	217 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	C1orf87	Q8N0U7	546 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	RAB39B	Q96DA2	213 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	OR2V2	Q96R30	315 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318		Q9N2K0	584 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	MMP24	Q9Y5R2	645 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	ROS1	P08922	2347 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	DFFB	O76075	338 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	LINC00614	P0C842	121 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	OR5H8	P0DN80	308 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	OR13C7	P0DN81	318 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	DLK1	P80370	383 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	ACP7	Q6ZNF0	438 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	TMEM183A	Q8IXX5	376 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	MRPL30	Q8TCC3	161 aa	Known RBP	12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	HIST1H2BL	Q99880	126 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	RTBDN	Q9BSG5	229 aa	Predicted RBP	12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	DECR2	Q9NUI1	292 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	FBXO7	Q9Y3I1	522 aa		12.92	□□□□□ -0.34
DDX39A-209	ENST00000589318	CACNA1D	Q01668	2161 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	TRBV6-6	A0A0A6YYG2	114 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	RBFOX3	A6NFN3	312 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	SIRPB1	O00241	398 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	SPRY3	O43610	288 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	TRGC1	P0CF51	173 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	CFHR2	P36980	270 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	CEBPD	P49716	269 aa	Predicted RBP	12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	IAH1	Q2TAA2	248 aa	Predicted RBP	12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	C5orf24	Q7Z6I8	188 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	FAM219A	Q8IW50	185 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	OR10G4	Q8NGN3	311 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	NEK7	Q8TDX7	302 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	NIPSNAP3B	Q9BS92	247 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	NECAP2	Q9NVZ3	263 aa		12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	C14orf166	Q9Y224	244 aa	Known RBP	12.91	□□□□□ -0.34
DDX39A-209	ENST00000589318	HCFC1	P51610	2035 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	SHISA9	B4DS77	424 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318		M0R143	59 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	CYB5B	O43169	146 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	ZNF205	O95201	554 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	HAND1	O96004	215 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	IGHV1-46	P01743	117 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	TRGC2	P03986	189 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	HSPB1	P04792	205 aa	Known RBP	12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	CXCL1	P09341	107 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	RPS2	P15880	293 aa	Known RBP	12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	SELENOV	P59797	346 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	ZNF880	Q6PDB4	577 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	GAPT	Q8N292	157 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	PLPPR1	Q8TBJ4	325 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	ZNF2	Q9BSG1	426 aa	Predicted RBP	12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	NGB	Q9NPG2	151 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	KIAA1456	Q9P272	454 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	USP24	Q9UPU5	2620 aa		12.9	□□□□□ -0.34
DDX39A-209	ENST00000589318	SH2D1B	O14796	132 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	PHOX2A	O14813	284 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	OR4A8	P0C604	315 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	EGR1	P18146	543 aa		12.9	□□□□□ -0.35
DDX39A-209	ENST00000589318	GLRA1	P23415	457 aa		12.9	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms