RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 PTGFRP43088 359 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 DVL1P1P54792 670 aaPredicted RBP2.69□□□□□ -1.98
ZNF540-207ENST00000589285 ATP5J2P56134 94 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 UBE2MP61081 183 aaKnown RBP2.69□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF181Q2M3W8 571 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 Q5BKY6 102 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 XKRXQ6PP77 449 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 C17orf107Q6ZR85 190 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 Q6ZTC4 211 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 FOXL2NBQ6ZUU3 175 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 FTMTQ8N4E7 242 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 BEST4Q8NFU0 473 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 OR6Q1Q8NGQ2 317 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 TAF15Q92804 592 aaKnown RBP eCLIP2.69□□□□□ -1.98
ZNF540-207ENST00000589285 TOMM40LQ969M1 308 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 SLC25A46Q96AG3 418 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 SAT2Q96F10 170 aaPredicted RBP2.69□□□□□ -1.98
ZNF540-207ENST00000589285 TECTBQ96PL2 329 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 MIXL1Q9H2W2 232 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 PLEKHJ1Q9NW61 149 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 RPH3ALQ9UNE2 315 aa2.69□□□□□ -1.98
ZNF540-207ENST00000589285 RBM7Q9Y580 266 aaKnown RBP2.69□□□□□ -1.98
ZNF540-207ENST00000589285 H7C417 338 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 BMPR1BO00238 502 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 IGHV1-46P01743 117 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 MT-ND4P03905 459 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 TRAPPC2P0DI81 140 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 TRAPPC2BP0DI82 140 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 OTX1P32242 354 aaPredicted RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 GLP1RP43220 463 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 ATP1B3P54709 279 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 SNRPD2P62316 118 aaKnown RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 TFF3Q07654 80 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 UNC119Q13432 240 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 ZFP69Q49AA0 526 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 BEX5Q5H9J7 111 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 OR2B11Q5JQS5 317 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 ETFRF1Q6IPR1 90 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 LYPD2Q6UXB3 125 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 BAIAP2L2Q6UXY1 529 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 Q8N402 240 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 POC5Q8NA72 575 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 OR10V1Q8NGI7 309 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 OR13G1Q8NGZ3 307 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 RNASE11Q8TAA1 199 aaKnown RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 THRSPQ92748 146 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 ST6GAL2Q96JF0 529 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 CHST5Q9GZS9 411 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 GSN-AS1Q9NRJ2 163 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 PLSCR3Q9NRY6 295 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 TAS2R3Q9NYW6 316 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 RNF150Q9ULK6 438 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 AMDHD2Q9Y303 409 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 A0A1B0GV90 55 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 CENPXA8MT69 81 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 ADAM20O43506 726 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 TNFSF12O43508 249 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 ZNF780AO75290 641 aaPredicted RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 CRHP06850 196 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 HOXD4P09016 255 aaPredicted RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 NFYAP23511 347 aaPredicted RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 CD24P25063 80 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 GLRXP35754 106 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 CCR6P51684 374 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 PPP5CP53041 499 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 PDZK1IP1Q13113 114 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 CDNFQ49AH0 187 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 NCMAPQ5T1S8 102 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 UTF1Q5T230 341 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 TMED4Q7Z7H5 227 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 MKXQ8IYA7 352 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 OR8G5Q8NG78 346 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 MRGPRDQ8TDS7 321 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 FCAMRQ8WWV6 532 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 SLC25A38Q96DW6 304 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 DUX5Q96PT3 197 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 SLC6A7Q99884 636 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 MMP28Q9H239 520 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 SIRT7Q9NRC8 400 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 IL19Q9UHD0 177 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 HCFC1P51610 2035 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 SORL1Q92673 2214 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 MEIKINA0A087WXM9 373 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 A0A0A6YYD4 124 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 TRBV5-5A0A0J9YX44 114 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 XKRY2A2RUG3 117 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 LINC00862A6NCI5 91 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 AIPO00170 330 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 GATBO75879 557 aaKnown RBP2.68□□□□□ -1.98
ZNF540-207ENST00000589285 DIRAS3O95661 229 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 PMP2P02689 132 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 RLN1P04808 185 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 IRF2P14316 349 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 PGAM2P15259 253 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 HNF1AP20823 631 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 S100PP25815 95 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 SSTR5P35346 364 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 PMELP40967 661 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 GLIPR1P48060 266 aa2.68□□□□□ -1.98
ZNF540-207ENST00000589285 CDC34P49427 236 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms