RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 METTL1Q9UBP6 276 aaKnown RBP10.73□□□□□ -0.69
VMP1-209ENST00000588915 MGAT4AQ9UM21 535 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 A3GALT2U3KPV4 340 aa10.73□□□□□ -0.69
VMP1-209ENST00000588915 A0A0G2JLM5 398 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 H0Y980 276 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 BRI3O95415 125 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 ST3GAL4Q11206 333 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 PSG5Q15238 335 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 RPL39P5Q59GN2 51 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 C1orf100Q5SVJ3 147 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 GLT8D1Q68CQ7 371 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 C6orf201Q7Z4U5 140 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 PTX4Q96A99 478 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 MS4A10Q96PG2 267 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 SPATA25Q9BR10 227 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 TMEM59Q9BXS4 323 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 BIRC6Q9NR09 4857 aa10.72□□□□□ -0.69
VMP1-209ENST00000588915 BPNT1O95861 308 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 TRGV3P03979 118 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 CD37P11049 281 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 ZBTB25P24278 435 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 ZFAND6Q6FIF0 208 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 GLDNQ6ZMI3 551 aaPredicted RBP10.71□□□□□ -0.69
VMP1-209ENST00000588915 MS4A15Q8N5U1 240 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 POC5Q8NA72 575 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 PHYHIPQ92561 330 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 ABHD14BQ96IU4 210 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 CYYR1Q96J86 154 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 FAM103A1Q9BTL3 118 aaKnown RBP10.71□□□□□ -0.69
VMP1-209ENST00000588915 C8orf4Q9NR00 106 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 SIGLEC8Q9NYZ4 499 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 GAB2Q9UQC2 676 aa10.71□□□□□ -0.69
VMP1-209ENST00000588915 EPPK1P58107 5090 aaKnown RBP10.7□□□□□ -0.7
VMP1-209ENST00000588915 C13orf42A0A1B0GVH6 325 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 CA2P00918 260 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 IFNA6P05013 189 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 CPEP16870 476 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 AADACP22760 399 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 HTR2CP28335 458 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 CEACAM6P40199 344 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 WNT4P56705 351 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 RPS16P62249 146 aaKnown RBP10.7□□□□□ -0.7
VMP1-209ENST00000588915 KLF5Q13887 457 aaPredicted RBP10.7□□□□□ -0.7
VMP1-209ENST00000588915 FXYD3Q14802 87 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 TATDN3Q17R31 274 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 PDPNQ86YL7 162 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 CLCC1Q96S66 551 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 C11orf54Q9H0W9 315 aaPredicted RBP10.7□□□□□ -0.7
VMP1-209ENST00000588915 CHMP1AQ9HD42 196 aaPredicted RBP10.7□□□□□ -0.7
VMP1-209ENST00000588915 PLCXD1Q9NUJ7 323 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 PLEKHJ1Q9NW61 149 aa10.7□□□□□ -0.7
VMP1-209ENST00000588915 NKX1-2Q9UD57 310 aaPredicted RBP10.7□□□□□ -0.7
VMP1-209ENST00000588915 PNMA8CA0A1B0GUJ8 204 aa10.69□□□□□ -0.7
VMP1-209ENST00000588915 TMEM14DPA8MWL7 114 aa10.69□□□□□ -0.7
VMP1-209ENST00000588915 MYL12BO14950 172 aa10.69□□□□□ -0.7
VMP1-209ENST00000588915 PROP1O75360 226 aa10.69□□□□□ -0.7
VMP1-209ENST00000588915 OR10K2Q6IF99 312 aa10.69□□□□□ -0.7
VMP1-209ENST00000588915 NANOGP1Q8N7R0 232 aa10.69□□□□□ -0.7
VMP1-209ENST00000588915 OR9G4Q8NGQ1 327 aa10.69□□□□□ -0.7
VMP1-209ENST00000588915 IL17DQ8TAD2 202 aa10.69□□□□□ -0.7
VMP1-209ENST00000588915 RSRP1Q9BUV0 290 aa10.69□□□□□ -0.7
VMP1-209ENST00000588915 GAR1Q9NY12 217 aaKnown RBP10.69□□□□□ -0.7
VMP1-209ENST00000588915 ZNF221Q9UK13 617 aa10.69□□□□□ -0.7
VMP1-209ENST00000588915 APOA2P02652 100 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 ARSBP15848 533 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 LGALS7P47929 136 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 HLA-DRB3P79483 266 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 QRFPP83859 136 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 UNC119Q13432 240 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 HAGHQ16775 308 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 ACSM3Q53FZ2 586 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 LRRTM1Q86UE6 522 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 GTSCR1Q86UQ5 136 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 FAM89BQ8N5H3 189 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 DHRSXQ8N5I4 330 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 PACRGLQ8N7B6 248 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.68□□□□□ -0.7
VMP1-209ENST00000588915 SETD6Q8TBK2 473 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 CYGBQ8WWM9 190 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 USMG5Q96IX5 58 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 URM1Q9BTM9 101 aaKnown RBP10.68□□□□□ -0.7
VMP1-209ENST00000588915 PARP12Q9H0J9 701 aaKnown RBP10.68□□□□□ -0.7
VMP1-209ENST00000588915 ZNF355PQ9NSJ1 428 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 PSORS1C1Q9UIG5 152 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 HSF4Q9ULV5 492 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 TNCP24821 2201 aa10.68□□□□□ -0.7
VMP1-209ENST00000588915 IGKV1-16P04430 117 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 SRMP19623 302 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 TAGLNQ01995 201 aaKnown RBP10.67□□□□□ -0.7
VMP1-209ENST00000588915 RNLSQ5VYX0 342 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 LCN12Q6JVE5 192 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 ZNF343Q6P1L6 599 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 IL34Q6ZMJ4 242 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 Q8N402 240 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 ZNF383Q8NA42 475 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 OR5T1Q8NG75 326 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 OR2K2Q8NGT1 345 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 NICN1Q9BSH3 213 aa10.67□□□□□ -0.7
VMP1-209ENST00000588915 THAP7Q9BT49 309 aaPredicted RBP10.67□□□□□ -0.7
VMP1-209ENST00000588915 TINAGL1Q9GZM7 467 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms