RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 GHITMQ9H3K2 345 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 UNKLQ9H9P5 680 aaKnown RBP11.81□□□□□ -0.52
NPC1-207ENST00000588867 KCNIP3Q9Y2W7 256 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 AUP1Q9Y679 476 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 C9orf170A2RU37 121 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 RNASEK-C17orf49H0YIS7 233 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 M0R1X1 148 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 PROP1O75360 226 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 HOXB4P17483 251 aaPredicted RBP11.81□□□□□ -0.52
NPC1-207ENST00000588867 UBE2MP61081 183 aaKnown RBP11.81□□□□□ -0.52
NPC1-207ENST00000588867 RND3P61587 244 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 SUPT4H1P63272 117 aaKnown RBP11.81□□□□□ -0.52
NPC1-207ENST00000588867 SP6Q3SY56 376 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 NCR3LG1Q68D85 454 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 HCP5Q6MZN7 132 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 LYG2Q86SG7 212 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 UXS1Q8NBZ7 420 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 NAA60Q9H7X0 242 aa11.81□□□□□ -0.52
NPC1-207ENST00000588867 C3orf85A0A1B0GTC6 90 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 CREBL2O60519 120 aaPredicted RBP11.8□□□□□ -0.52
NPC1-207ENST00000588867 IGLV1-47P01700 117 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 LINC00205P59089 165 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 HLA-DRB5Q30154 266 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 CYB5R2Q6BCY4 276 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 C11orf88Q6PI97 169 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 BEND2Q8NDZ0 799 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 OR11H6Q8NGC7 330 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 OR51J1Q9H342 316 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 PRR13Q9NZ81 148 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 GAB2Q9UQC2 676 aa11.8□□□□□ -0.52
NPC1-207ENST00000588867 BUB1B-PAK6H3BSN5 160 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 SFT2D2O95562 160 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 IFNA2P01563 188 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 GATA3P23771 443 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 IL3RAP26951 378 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 REG1BP48304 166 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 MSMO1Q15800 293 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.79□□□□□ -0.52
NPC1-207ENST00000588867 ZNF431Q8TF32 576 aaPredicted RBP11.79□□□□□ -0.52
NPC1-207ENST00000588867 TCTEX1D2Q8WW35 142 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 C7orf66A4D0T2 115 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 RNF212BA8MTL3 300 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 SSNA1O43805 119 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 F2RP25116 425 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 LGALS4P56470 323 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 RPL30P62888 115 aaKnown RBP11.79□□□□□ -0.52
NPC1-207ENST00000588867 DIAPH2-AS1Q14236 149 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 ZNF626Q68DY1 528 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 OR4P4Q8NGL7 312 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 TP53RKQ96S44 253 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 HSD17B10Q99714 261 aaKnown RBP11.79□□□□□ -0.52
NPC1-207ENST00000588867 ZNF251Q9BRH9 671 aa11.79□□□□□ -0.52
NPC1-207ENST00000588867 AMMECR1Q9Y4X0 333 aaPredicted RBP11.79□□□□□ -0.52
NPC1-207ENST00000588867 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.78□□□□□ -0.522e-18■■■□□ 16.7
NPC1-207ENST00000588867 NOTCH2Q04721 2471 aa11.78□□□□□ -0.52
NPC1-207ENST00000588867 SNRPGP15A8MWD9 76 aa11.78□□□□□ -0.52
NPC1-207ENST00000588867 ANXA3P12429 323 aa11.78□□□□□ -0.52
NPC1-207ENST00000588867 HTR1DP28221 377 aa11.78□□□□□ -0.52
NPC1-207ENST00000588867 DUTP33316 252 aaKnown RBP11.78□□□□□ -0.52
NPC1-207ENST00000588867 CATR1Q13166 79 aa11.78□□□□□ -0.52
NPC1-207ENST00000588867 OR2B11Q5JQS5 317 aa11.78□□□□□ -0.52
NPC1-207ENST00000588867 LIN54Q6MZP7 749 aa11.78□□□□□ -0.52
NPC1-207ENST00000588867 ZNF66Q6ZN08 573 aa11.78□□□□□ -0.52
NPC1-207ENST00000588867 BAHCC1Q9P281 2608 aa11.78□□□□□ -0.52
NPC1-207ENST00000588867 IGHV3OR16-10A0A075B7F0 116 aa11.77□□□□□ -0.52
NPC1-207ENST00000588867 LINC00473A8K010 186 aa11.77□□□□□ -0.52
NPC1-207ENST00000588867 DUS4LO95620 317 aaKnown RBP11.77□□□□□ -0.52
NPC1-207ENST00000588867 UBE2E1P51965 193 aa11.77□□□□□ -0.52
NPC1-207ENST00000588867 EIF4EBP1Q13541 118 aaPredicted RBP11.77□□□□□ -0.52
NPC1-207ENST00000588867 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.52
NPC1-207ENST00000588867 KCTD9Q7L273 389 aa11.77□□□□□ -0.52
NPC1-207ENST00000588867 CADM3Q8N126 398 aa11.77□□□□□ -0.52
NPC1-207ENST00000588867 C12orf45Q8N5I9 185 aaPredicted RBP11.77□□□□□ -0.52
NPC1-207ENST00000588867 ST6GALNAC6Q969X2 333 aa11.77□□□□□ -0.52
NPC1-207ENST00000588867 ITPR3Q14573 2671 aa11.77□□□□□ -0.52
NPC1-207ENST00000588867 CENPVL3A0A0U1RRI6 287 aa11.77□□□□□ -0.53
NPC1-207ENST00000588867 ODF3BA8MYP8 253 aa11.77□□□□□ -0.53
NPC1-207ENST00000588867 LHFPL4Q7Z7J7 247 aa11.77□□□□□ -0.53
NPC1-207ENST00000588867 TGIF2LXQ8IUE1 241 aa11.77□□□□□ -0.53
NPC1-207ENST00000588867 GLYATL2Q8WU03 294 aa11.77□□□□□ -0.53
NPC1-207ENST00000588867 RPEQ96AT9 228 aa11.77□□□□□ -0.53
NPC1-207ENST00000588867 GALNT14Q96FL9 552 aa11.77□□□□□ -0.53
NPC1-207ENST00000588867 PHB2Q99623 299 aa11.77□□□□□ -0.53
NPC1-207ENST00000588867 MED28Q9H204 178 aa11.77□□□□□ -0.53
NPC1-207ENST00000588867 LIN7CQ9NUP9 197 aaKnown RBP11.77□□□□□ -0.53
NPC1-207ENST00000588867 HILPDAQ9Y5L2 63 aa11.77□□□□□ -0.53
NPC1-207ENST00000588867 TRAV40A0A0B4J280 105 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 LEUTXA8MZ59 168 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 AVPP01185 164 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 CT45A6P0DMU7 189 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 CT45A5P0DMU8 189 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 CT45A7P0DMV0 189 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 TMEM187Q14656 261 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 ANKRD55Q3KP44 614 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 COQ8AQ8NI60 647 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 MITD1Q8WV92 249 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 DPM3Q9P2X0 92 aa11.76□□□□□ -0.53
NPC1-207ENST00000588867 A8MV72 311 aaPredicted RBP11.76□□□□□ -0.53
NPC1-207ENST00000588867 H0Y980 276 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms