RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 ARL6IP1Q15041 203 aa15.35■□□□□ 0.05
TPM4-208ENST00000588410 ETV3LQ6ZN32 361 aa15.35■□□□□ 0.05
TPM4-208ENST00000588410 CHCHD6Q9BRQ6 235 aa15.35■□□□□ 0.05
TPM4-208ENST00000588410 GPR61Q9BZJ8 451 aa15.35■□□□□ 0.05
TPM4-208ENST00000588410 ZNF580Q9UK33 172 aa15.35■□□□□ 0.05
TPM4-208ENST00000588410 H0YJW9 148 aa15.34■□□□□ 0.05
TPM4-208ENST00000588410 MFNGO00587 321 aa15.34■□□□□ 0.05
TPM4-208ENST00000588410 RBBP9O75884 186 aa15.34■□□□□ 0.05
TPM4-208ENST00000588410 IGHG4P01861 327 aa15.34■□□□□ 0.05
TPM4-208ENST00000588410 LCNL1Q6ZST4 164 aa15.34■□□□□ 0.05
TPM4-208ENST00000588410 NR2C2APQ86WQ0 139 aa15.34■□□□□ 0.05
TPM4-208ENST00000588410 OR10J5Q8NHC4 309 aa15.34■□□□□ 0.05
TPM4-208ENST00000588410 WSB1Q9Y6I7 421 aa15.34■□□□□ 0.05
TPM4-208ENST00000588410 ATP6V0E1O15342 81 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 NDUFA3O95167 84 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 GSTT2P0CG29 244 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 GSTT2BP0CG30 244 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 CFHR3Q02985 330 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 TMEM65Q6PI78 240 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 RNF152Q8N8N0 203 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 DRAXINQ8NBI3 349 aaPredicted RBP15.33■□□□□ 0.04
TPM4-208ENST00000588410 OR5AN1Q8NGI8 311 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 MRAPQ8TCY5 172 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 MAFIPQ8WZ33 124 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 DPF1Q92782 380 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 RNF5Q99942 180 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 CENPOQ9BU64 300 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 MCRIP2Q9BUT9 160 aaKnown RBP15.33■□□□□ 0.04
TPM4-208ENST00000588410 OR51E2Q9H255 320 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 AURKAIP1Q9NWT8 199 aaPredicted RBP15.33■□□□□ 0.04
TPM4-208ENST00000588410 ZNF230Q9UIE0 474 aaPredicted RBP15.33■□□□□ 0.04
TPM4-208ENST00000588410 DAPK2Q9UIK4 370 aa15.33■□□□□ 0.04
TPM4-208ENST00000588410 RRP15Q9Y3B9 282 aaKnown RBP15.33■□□□□ 0.04
TPM4-208ENST00000588410 IGHV7-81A0A0B4J1V7 117 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 TRAV41A0A0B4J266 112 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 CCL24O00175 119 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 RRHO14718 337 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 APOA2P02652 100 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 TFAP2AP05549 437 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 CDX1P47902 265 aaPredicted RBP15.32■□□□□ 0.04
TPM4-208ENST00000588410 RAB25P57735 213 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 NEDD8Q15843 81 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 KCTD21Q4G0X4 260 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 IGSF11Q5DX21 431 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.32■□□□□ 0.04
TPM4-208ENST00000588410 OR8U1Q8NH10 309 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 DUX3Q96PT4 197 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 GINS4Q9BRT9 223 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 CABLES2Q9BTV7 478 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 FBXL15Q9H469 300 aa15.32■□□□□ 0.04
TPM4-208ENST00000588410 RBM7Q9Y580 266 aaKnown RBP15.32■□□□□ 0.04
TPM4-208ENST00000588410 LOC100506127A0A0U1RQW1 187 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 G3V318 75 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 M0R1X1 148 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 SCGNO76038 276 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 DIRAS3O95661 229 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 OR8U9P0C7N5 309 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 CDNFQ49AH0 187 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 ZNF660Q6AZW8 331 aaPredicted RBP15.31■□□□□ 0.04
TPM4-208ENST00000588410 SFXN4Q6P4A7 337 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 ABHD5Q8WTS1 349 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 P2RX4Q99571 388 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 TSNAXQ99598 290 aaKnown RBP15.31■□□□□ 0.04
TPM4-208ENST00000588410 TOLLIPQ9H0E2 274 aa15.31■□□□□ 0.04
TPM4-208ENST00000588410 TRBV6-7A0A0A0MS04 114 aa15.3■□□□□ 0.04
TPM4-208ENST00000588410 SNRPBP14678 240 aaKnown RBP15.3■□□□□ 0.04
TPM4-208ENST00000588410 PSMB8P28062 276 aa15.3■□□□□ 0.04
TPM4-208ENST00000588410 SDC2P34741 201 aa15.3■□□□□ 0.04
TPM4-208ENST00000588410 RPS16P62249 146 aaKnown RBP15.3■□□□□ 0.04
TPM4-208ENST00000588410 MXD1Q05195 221 aa15.3■□□□□ 0.04
TPM4-208ENST00000588410 SRSF7Q16629 238 aaKnown RBP eCLIP15.3■□□□□ 0.04
TPM4-208ENST00000588410 PDPNQ86YL7 162 aa15.3■□□□□ 0.04
TPM4-208ENST00000588410 ZNF383Q8NA42 475 aa15.3■□□□□ 0.04
TPM4-208ENST00000588410 RAX2Q96IS3 184 aa15.3■□□□□ 0.04
TPM4-208ENST00000588410 OR2D2Q9H210 308 aa15.3■□□□□ 0.04
TPM4-208ENST00000588410 METTL1Q9UBP6 276 aaKnown RBP15.3■□□□□ 0.04
TPM4-208ENST00000588410 PROP1O75360 226 aa15.29■□□□□ 0.04
TPM4-208ENST00000588410 CD36P16671 472 aa15.29■□□□□ 0.04
TPM4-208ENST00000588410 DTYMKP23919 212 aa15.29■□□□□ 0.04
TPM4-208ENST00000588410 CX3CL1P78423 397 aa15.29■□□□□ 0.04
TPM4-208ENST00000588410 ECSCRQ19T08 205 aa15.29■□□□□ 0.04
TPM4-208ENST00000588410 DEFB136Q30KP8 78 aa15.29■□□□□ 0.04
TPM4-208ENST00000588410 C4orf3Q8WVX3 66 aa15.29■□□□□ 0.04
TPM4-208ENST00000588410 FLYWCH2Q96CP2 140 aaKnown RBP15.29■□□□□ 0.04
TPM4-208ENST00000588410 CLCC1Q96S66 551 aa15.29■□□□□ 0.04
TPM4-208ENST00000588410 PPIFP30405 207 aaKnown RBP15.28■□□□□ 0.04
TPM4-208ENST00000588410 TMEM267Q0VDI3 215 aaPredicted RBP15.28■□□□□ 0.04
TPM4-208ENST00000588410 CBX3Q13185 183 aa15.28■□□□□ 0.04
TPM4-208ENST00000588410 PSG5Q15238 335 aa15.28■□□□□ 0.04
TPM4-208ENST00000588410 HACD4Q5VWC8 232 aa15.28■□□□□ 0.04
TPM4-208ENST00000588410 Q6ZS49 121 aa15.28■□□□□ 0.04
TPM4-208ENST00000588410 LGALS14Q8TCE9 139 aa15.28■□□□□ 0.04
TPM4-208ENST00000588410 ST6GALNAC5Q9BVH7 336 aa15.28■□□□□ 0.04
TPM4-208ENST00000588410 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.28■□□□□ 0.04
TPM4-208ENST00000588410 SLC35D1Q9NTN3 355 aa15.28■□□□□ 0.04
TPM4-208ENST00000588410 ELF5Q9UKW6 265 aaPredicted RBP15.28■□□□□ 0.04
TPM4-208ENST00000588410 GAB2Q9UQC2 676 aa15.28■□□□□ 0.04
TPM4-208ENST00000588410 A3GALT2U3KPV4 340 aa15.28■□□□□ 0.04
TPM4-208ENST00000588410 PLXNB1O43157 2135 aa15.28■□□□□ 0.04
TPM4-208ENST00000588410 FCN1O00602 326 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms