RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 IFNA2P01563 188 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 IGLV1-47P01700 117 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 HOXB4P17483 251 aaPredicted RBP9.2□□□□□ -0.94
VMP1-207ENST00000588131 PAX8Q06710 450 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 DIAPH2-AS1Q14236 149 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 TMEM187Q14656 261 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 FCN2Q15485 313 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 ANKRD55Q3KP44 614 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 C12orf45Q8N5I9 185 aaPredicted RBP9.2□□□□□ -0.94
VMP1-207ENST00000588131 ZBTB34Q8NCN2 500 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 OR13D1Q8NGV5 346 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 OR51H1Q8NH63 302 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 MITD1Q8WV92 249 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 GALNT14Q96FL9 552 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 PCGF1Q9BSM1 259 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 PIPOXQ9P0Z9 390 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 POLQO75417 2590 aa9.2□□□□□ -0.94
VMP1-207ENST00000588131 A0A1W2PRD5 423 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 A0A1W2PRF3 423 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 A0A1W2PRM7 423 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 LINC00473A8K010 186 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 H0Y980 276 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 RAB29O14966 203 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 SSNA1O43805 119 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 IGHV4-31P0DP07 118 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 ZNF16P17020 682 aaPredicted RBP9.19□□□□□ -0.94
VMP1-207ENST00000588131 F2RP25116 425 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 DUTP33316 252 aaKnown RBP9.19□□□□□ -0.94
VMP1-207ENST00000588131 RRAS2P62070 204 aaPredicted RBP9.19□□□□□ -0.94
VMP1-207ENST00000588131 C2orf68Q2NKX9 166 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 HLA-DRB5Q30154 266 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 ZNF833PQ6ZTB9 187 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 PDZD9Q8IXQ8 264 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 CIARTQ8N365 385 aaPredicted RBP9.19□□□□□ -0.94
VMP1-207ENST00000588131 LINC01356Q8N9X3 169 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 DRAXINQ8NBI3 349 aaPredicted RBP9.19□□□□□ -0.94
VMP1-207ENST00000588131 UXS1Q8NBZ7 420 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.19□□□□□ -0.94
VMP1-207ENST00000588131 BEND2Q8NDZ0 799 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 OR11H6Q8NGC7 330 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 OR11H7Q8NGC8 314 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 OR4P4Q8NGL7 312 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 OR10X1Q8NGY0 326 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 GLYATL2Q8WU03 294 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 CHAC2Q8WUX2 184 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 MSI2Q96DH6 328 aaKnown RBP9.19□□□□□ -0.94
VMP1-207ENST00000588131 MED28Q9H204 178 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 UNKLQ9H9P5 680 aaKnown RBP9.19□□□□□ -0.94
VMP1-207ENST00000588131 ABCA12Q86UK0 2595 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 APCP25054 2843 aa9.19□□□□□ -0.94
VMP1-207ENST00000588131 TRAV20A0A0B4J274 112 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 HMX3A6NHT5 357 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 A8MV72 311 aaPredicted RBP9.18□□□□□ -0.94
VMP1-207ENST00000588131 ODF3BA8MYP8 253 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 ARG1P05089 322 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 SULT1A3P0DMM9 295 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 SULT1A4P0DMN0 295 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 S100GP29377 79 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 ZNF137PP52743 207 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 PRRX1P54821 245 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 BRWD1-AS2P59051 145 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 TMEM249Q2WGJ8 235 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 OR2B11Q5JQS5 317 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 LDLRAD2Q5SZI1 272 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 DCAF12L2Q5VW00 463 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 NCR3LG1Q68D85 454 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 ZNF66Q6ZN08 573 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 LIAT1Q6ZQX7 453 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 KCTD9Q7L273 389 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 ZNF383Q8NA42 475 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 LHFPL5Q8TAF8 219 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 TCTEX1D2Q8WW35 142 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 LHX4Q969G2 390 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 ST6GALNAC6Q969X2 333 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 TMEM186Q96B77 213 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 RBMXL1Q96E39 390 aaKnown RBP9.18□□□□□ -0.94
VMP1-207ENST00000588131 PHB2Q99623 299 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 MRPL20Q9BYC9 149 aaKnown RBP9.18□□□□□ -0.94
VMP1-207ENST00000588131 HEXA-AS1Q9H8Q6 139 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 HIF1ANQ9NWT6 349 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 KCNIP3Q9Y2W7 256 aa9.18□□□□□ -0.94
VMP1-207ENST00000588131 PDZD2O15018 2839 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 TEP1Q99973 2627 aaKnown RBP9.17□□□□□ -0.94
VMP1-207ENST00000588131 A0A0B4J2A0 478 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 DBX1A6NMT0 343 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 RNF212BA8MTL3 300 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 LY6LH3BQJ8 138 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 BUB1B-PAK6H3BSN5 160 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 CCSO14618 274 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 CT45A6P0DMU7 189 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 CT45A5P0DMU8 189 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 CT45A7P0DMV0 189 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 ANXA3P12429 323 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 CXCL3P19876 107 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 UCP1P25874 307 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 REG1BP48304 166 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 CATR1Q13166 79 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 ZNF585BQ52M93 769 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 C11orf88Q6PI97 169 aa9.17□□□□□ -0.94
VMP1-207ENST00000588131 COQ8AQ8NI60 647 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms