RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 TRGV10A0A0A0MS01 117 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 IGSF23A1L1A6 192 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 ZNF729A6NN14 1252 aaPredicted RBP9.37□□□□□ -0.91
LIG3-204ENST00000585740 LGALS8O00214 317 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 TOR1AO14656 332 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 RAB29O14966 203 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 SIGLEC5O15389 551 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 CHST1O43916 411 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 DFFBO76075 338 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 IGKV1-5P01602 117 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 TFF1P04155 84 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 CD3EP07766 207 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 SPP1P10451 314 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 CHRNB4P30926 498 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 KIR2DS2P43631 304 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 GPR12P47775 334 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 ARHGDIBP52566 201 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 EDDM3BP56851 147 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 MORN2Q502X0 79 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 SPRNQ5BIV9 151 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 ZNF788Q6ZQV5 615 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 COMMD1Q8N668 190 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 TPRX1Q8N7U7 411 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 TCTEX1D2Q8WW35 142 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 CORO2AQ92828 525 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 LINC00052Q96N35 136 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 WFIKKN1Q96NZ8 548 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 GAFA1Q96PS6 74 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 MAGT1Q9H0U3 335 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 COQ3Q9NZJ6 369 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 NDRG3Q9UGV2 375 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 RNF150Q9ULK6 438 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 RNF115Q9Y4L5 304 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 NBPF19A0A087WUL8 3843 aa9.37□□□□□ -0.91
LIG3-204ENST00000585740 A0A0G2JRQ6 117 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 TRIM77I1YAP6 450 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 SYNGR2O43760 224 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 FBXO24O75426 580 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
LIG3-204ENST00000585740 CLDN14O95500 239 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 LY86O95711 162 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 CRYZL1O95825 349 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 CYB5R3P00387 301 aaPredicted RBP9.36□□□□□ -0.91
LIG3-204ENST00000585740 CGB3P0DN86 165 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 CGB7P0DN87 165 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 SULT1A1P50225 295 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 F2RL1P55085 397 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 HOXA4Q00056 320 aaPredicted RBP9.36□□□□□ -0.91
LIG3-204ENST00000585740 NHLH2Q02577 135 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 PJVKQ0ZLH3 352 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 SPAG16Q8N0X2 631 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 FGFRL1Q8N441 504 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 ZNF808Q8N4W9 903 aaPredicted RBP9.36□□□□□ -0.91
LIG3-204ENST00000585740 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.36□□□□□ -0.91
LIG3-204ENST00000585740 ZNRF1Q8ND25 227 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 OR10A7Q8NGE5 316 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 RFESDQ8TAC1 157 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
LIG3-204ENST00000585740 BSCL2Q96G97 398 aaPredicted RBP9.36□□□□□ -0.91
LIG3-204ENST00000585740 MS4A5Q9H3V2 200 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 WFDC1Q9HC57 220 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 GFOD1Q9NXC2 390 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 CACFD1Q9UGQ2 172 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 PSG11Q9UQ72 335 aa9.36□□□□□ -0.91
LIG3-204ENST00000585740 TEP1Q99973 2627 aaKnown RBP9.36□□□□□ -0.91
LIG3-204ENST00000585740 TLN1Q9Y490 2541 aaKnown RBP9.36□□□□□ -0.91
LIG3-204ENST00000585740 IGHV3-43A0A0B4J1X8 118 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 KBTBD11-OT1A0A1B0GTJ5 212 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 FAM90A9PA6NNJ1 464 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 KIAA1324LA8MWY0 1029 aaPredicted RBP9.35□□□□□ -0.91
LIG3-204ENST00000585740 B9A039 149 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 UMAD1C9J7I0 102 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 ST8SIA5O15466 376 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 RBFOX2O43251 390 aaKnown RBP eCLIP9.35□□□□□ -0.91
LIG3-204ENST00000585740 TXNL1O43396 289 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 DANCRP0C864 163 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 P0C879 139 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 IGHV3-43DP0DP04 118 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 M6PRP20645 277 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 APOBEC3AP31941 199 aaPredicted RBP9.35□□□□□ -0.91
LIG3-204ENST00000585740 DYNLT3P51808 116 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 MEF2CQ06413 473 aaPredicted RBP9.35□□□□□ -0.91
LIG3-204ENST00000585740 EFNB3Q15768 340 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 MST1LQ2TV78 715 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 Q3ZCU0 254 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 MIDNQ504T8 468 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 PXDC1Q5TGL8 231 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 ADAM5Q6NVV9 412 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 C5orf30Q96GV9 206 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 ADTRPQ96IZ2 230 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 ATP5SQ99766 215 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 AGMATQ9BSE5 352 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 DCTN5Q9BTE1 182 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 LINC00574Q9H8X3 128 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 SAP30LQ9HAJ7 183 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 DYNLRB1Q9NP97 96 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.35□□□□□ -0.91
LIG3-204ENST00000585740 IDI2-AS1Q9NZ38 188 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 PSENENQ9NZ42 101 aa9.35□□□□□ -0.91
LIG3-204ENST00000585740 CLN8Q9UBY8 286 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms