RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 DBX1A6NMT0 343 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 TOX4O94842 621 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 F2RP25116 425 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 IL24Q13007 206 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 LHFPL1Q86WI0 220 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 C14orf79Q96F83 325 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 ATPIF1Q9UII2 106 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 MBD3L4A6NDZ8 208 aaPredicted RBP8.58□□□□□ -1.04
RFFL-212ENST00000584655 MBD3L3A6NE82 208 aaPredicted RBP8.58□□□□□ -1.04
RFFL-212ENST00000584655 MBD3L5A6NJ08 208 aaPredicted RBP8.58□□□□□ -1.04
RFFL-212ENST00000584655 BCL2L11O43521 198 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 TMEM50AO95807 157 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 CGAP01215 116 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 MECP2P51608 486 aaKnown RBP8.58□□□□□ -1.04
RFFL-212ENST00000584655 MBD3L2Q8NHZ7 208 aaPredicted RBP8.58□□□□□ -1.04
RFFL-212ENST00000584655 MRPS24Q96EL2 167 aaKnown RBP8.58□□□□□ -1.04
RFFL-212ENST00000584655 RSRP1Q9BUV0 290 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 ONECUT1Q9UBC0 465 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 PUS1Q9Y606 427 aaKnown RBP eCLIP8.58□□□□□ -1.04
RFFL-212ENST00000584655 LGALS4P56470 323 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 ARF6P62330 175 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 CYCSP99999 105 aaKnown RBP8.58□□□□□ -1.04
RFFL-212ENST00000584655 SSBP1Q04837 148 aaKnown RBP8.58□□□□□ -1.04
RFFL-212ENST00000584655 ADIPOQQ15848 244 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 PCSK4Q6UW60 755 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 H2BFWTQ7Z2G1 175 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 C10orf35Q96D05 121 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 WFDC1Q9HC57 220 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 NIT2Q9NQR4 276 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 NF1P21359 2839 aa8.58□□□□□ -1.04
RFFL-212ENST00000584655 TRAV20A0A0B4J274 112 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 A0A0D9SG52 128 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 LINC00473A8K010 186 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 IQCF6A8MYZ5 107 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 TSPAN15O95858 294 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 DTYMKP23919 212 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 PUSL1Q8N0Z8 303 aaKnown RBP8.57□□□□□ -1.04
RFFL-212ENST00000584655 ABHD12Q8N2K0 398 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 OR10Z1Q8NGY1 313 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 GP6Q9HCN6 339 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 RAB18Q9NP72 206 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 KCNJ16Q9NPI9 418 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 SLC2A8Q9NY64 477 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 RNF7Q9UBF6 113 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 NDRG3Q9UGV2 375 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 IGHV3OR16-8A0A075B7F1 116 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 IGHV3-35A0A0C4DH35 117 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 ACTL6BO94805 426 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 HKR1P10072 659 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 TBPP20226 339 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 HES1Q14469 280 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 MPV17LQ2QL34 196 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 KRTCAP3Q53RY4 240 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 SELENOHQ8IZQ5 122 aaKnown RBP8.57□□□□□ -1.04
RFFL-212ENST00000584655 SVBPQ8N300 66 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 SSMEM1Q8WWF3 244 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 C19orf12Q9NSK7 152 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 HSF4Q9ULV5 492 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 WSB1Q9Y6I7 421 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 A0A0U1RQK1 487 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 IGSF23A1L1A6 192 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 CD3EP07766 207 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 RAB13P51153 203 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 UBE2G2P60604 165 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 SNRPEP62304 92 aaKnown RBP8.57□□□□□ -1.04
RFFL-212ENST00000584655 C10orf55Q5SWW7 151 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 POC1AQ8NBT0 407 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 OR10X1Q8NGY0 326 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 PLEKHF2Q9H8W4 249 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 PSENENQ9NZ42 101 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 GCN1Q92616 2671 aaKnown RBP8.57□□□□□ -1.04
RFFL-212ENST00000584655 CLEC18AA5D8T8 446 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 THBDP07204 575 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 GLRXP35754 106 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 ZNF134P52741 427 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 UBA52P62987 128 aaKnown RBP8.57□□□□□ -1.04
RFFL-212ENST00000584655 MIDNQ504T8 468 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 PRSS54Q6PEW0 395 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 OR2C3Q8N628 320 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 CLEC18CQ8NCF0 446 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 MSI2Q96DH6 328 aaKnown RBP8.57□□□□□ -1.04
RFFL-212ENST00000584655 AKR1E2Q96JD6 320 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 AUP1Q9Y679 476 aa8.57□□□□□ -1.04
RFFL-212ENST00000584655 FOXI3A8MTJ6 420 aaPredicted RBP8.56□□□□□ -1.04
RFFL-212ENST00000584655 E7EQL1 145 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 NAPSAO96009 420 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 COX5AP20674 150 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 IGFL2Q6UWQ7 119 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 MUC15Q8N387 334 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 PNKDQ8N490 385 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 LILRB1Q8NHL6 650 aaPredicted RBP8.56□□□□□ -1.04
RFFL-212ENST00000584655 TMEM222Q9H0R3 208 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 PET100P0DJ07 73 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 COX5BP10606 129 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 UCNP55089 124 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 PEA15Q15121 130 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 PRR31Q5SQ13 230 aa8.56□□□□□ -1.04
RFFL-212ENST00000584655 ALX4Q9H161 411 aaPredicted RBP8.56□□□□□ -1.04
RFFL-212ENST00000584655 SLC25A10Q9UBX3 287 aaPredicted RBP8.56□□□□□ -1.04
RFFL-212ENST00000584655 COL5A1P20908 1838 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms