RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ZANQ9Y493 2812 aa14.84□□□□□ -0.03
RFFL-211ENST00000584541 CSPG4Q6UVK1 2322 aa14.83□□□□□ -0.03
RFFL-211ENST00000584541 FAM240BA0A1B0GVZ2 78 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 LY6LH3BQJ8 138 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 GPR31O00270 319 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 FBP1P09467 338 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 CCR6P51684 374 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 ZNF816Q0VGE8 651 aaPredicted RBP14.83□□□□□ -0.04
RFFL-211ENST00000584541 SSX2Q16385 188 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 ABCA11PQ4W5N1 156 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 RPL39P5Q59GN2 51 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 ZNF833PQ6ZTB9 187 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 C9orf139Q6ZV77 190 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 DRAM1Q8N682 238 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 ENKURQ8TC29 256 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 ST6GALNAC6Q969X2 333 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 ZNF486Q96H40 463 aaPredicted RBP14.83□□□□□ -0.04
RFFL-211ENST00000584541 RSRP1Q9BUV0 290 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 C14orf166Q9Y224 244 aaKnown RBP14.83□□□□□ -0.04
RFFL-211ENST00000584541 F8P00451 2351 aa14.83□□□□□ -0.04
RFFL-211ENST00000584541 A0A0U1RQK1 487 aa14.82□□□□□ -0.04
RFFL-211ENST00000584541 M0R1X1 148 aa14.82□□□□□ -0.04
RFFL-211ENST00000584541 GNRHRP30968 328 aa14.82□□□□□ -0.04
RFFL-211ENST00000584541 REG1BP48304 166 aa14.82□□□□□ -0.04
RFFL-211ENST00000584541 BAMBIQ13145 260 aa14.82□□□□□ -0.04
RFFL-211ENST00000584541 ZNF818PQ6ZRF7 136 aa14.82□□□□□ -0.04
RFFL-211ENST00000584541 OR8H3Q8N146 312 aa14.82□□□□□ -0.04
RFFL-211ENST00000584541 ZDHHC22Q8N966 263 aa14.82□□□□□ -0.04
RFFL-211ENST00000584541 RTN4IP1Q8WWV3 396 aaPredicted RBP14.82□□□□□ -0.04
RFFL-211ENST00000584541 COPZ2Q9P299 210 aa14.82□□□□□ -0.04
RFFL-211ENST00000584541 CELSR1Q9NYQ6 3014 aa14.82□□□□□ -0.04
RFFL-211ENST00000584541 NDUFB6O95139 128 aa14.81□□□□□ -0.04
RFFL-211ENST00000584541 CTSDP07339 412 aaPredicted RBP14.81□□□□□ -0.04
RFFL-211ENST00000584541 SLC6A1P30531 599 aa14.81□□□□□ -0.04
RFFL-211ENST00000584541 BTCP35070 178 aa14.81□□□□□ -0.04
RFFL-211ENST00000584541 LDLRAD2Q5SZI1 272 aa14.81□□□□□ -0.04
RFFL-211ENST00000584541 CCDC71LQ8N9Z2 235 aa14.81□□□□□ -0.04
RFFL-211ENST00000584541 BVESQ8NE79 360 aa14.81□□□□□ -0.04
RFFL-211ENST00000584541 MRGPRFQ96AM1 343 aa14.81□□□□□ -0.04
RFFL-211ENST00000584541 ADTRPQ96IZ2 230 aa14.81□□□□□ -0.04
RFFL-211ENST00000584541 HSD17B10Q99714 261 aaKnown RBP14.81□□□□□ -0.04
RFFL-211ENST00000584541 ZNF251Q9BRH9 671 aa14.81□□□□□ -0.04
RFFL-211ENST00000584541 C2CD3Q4AC94 2353 aa14.81□□□□□ -0.04
RFFL-211ENST00000584541 RNF212BA8MTL3 300 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 INAFM1C9JVW0 142 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 IGLV2-14P01704 120 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 SRD5A1P18405 259 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 BRS3P32247 399 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 THBS3P49746 956 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 DIAPH2-AS1Q14236 149 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 PHLDA2Q53GA4 152 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 ZNF66Q6ZN08 573 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 MOB3BQ86TA1 216 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 BCL6BQ8N143 479 aaPredicted RBP14.8□□□□□ -0.04
RFFL-211ENST00000584541 C17orf50Q8WW18 174 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 C22orf15Q8WYQ4 148 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 MEGF9Q9H1U4 602 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 GPR132Q9UNW8 380 aa14.8□□□□□ -0.04
RFFL-211ENST00000584541 IGHV1-3A0A0C4DH29 117 aa14.79□□□□□ -0.04
RFFL-211ENST00000584541 TNFSF12O43508 249 aa14.79□□□□□ -0.04
RFFL-211ENST00000584541 PIGPP57054 158 aa14.79□□□□□ -0.04
RFFL-211ENST00000584541 CATR1Q13166 79 aa14.79□□□□□ -0.04
RFFL-211ENST00000584541 ZDHHC16Q969W1 377 aa14.79□□□□□ -0.04
RFFL-211ENST00000584541 AJUBAQ96IF1 538 aa14.79□□□□□ -0.04
RFFL-211ENST00000584541 MRPL20Q9BYC9 149 aaKnown RBP14.79□□□□□ -0.04
RFFL-211ENST00000584541 SLC2A9Q9NRM0 540 aa14.79□□□□□ -0.04
RFFL-211ENST00000584541 VSIG4Q9Y279 399 aa14.79□□□□□ -0.04
RFFL-211ENST00000584541 A0A1W2PPI3 338 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 PROP1O75360 226 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 APOA2P02652 100 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 TCRBP04435 133 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 RLN1P04808 185 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 PI3P19957 117 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 DUTP33316 252 aaKnown RBP14.78□□□□□ -0.04
RFFL-211ENST00000584541 RND3P61587 244 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 TAGLNQ01995 201 aaKnown RBP14.78□□□□□ -0.04
RFFL-211ENST00000584541 DEFB112Q30KQ8 113 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 KCTD9Q7L273 389 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 DYNAPQ8N1N2 210 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 DRAXINQ8NBI3 349 aaPredicted RBP14.78□□□□□ -0.04
RFFL-211ENST00000584541 TCTEX1D2Q8WW35 142 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 C5orf30Q96GV9 206 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 NABP2Q9BQ15 211 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 PRELID3BQ9Y3B1 194 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 HIVEP1P15822 2718 aa14.78□□□□□ -0.04
RFFL-211ENST00000584541 TIMM23O14925 209 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 PGLYRP1O75594 196 aaPredicted RBP14.77□□□□□ -0.05
RFFL-211ENST00000584541 PTTG1O95997 202 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 CT45A6P0DMU7 189 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 CT45A5P0DMU8 189 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 CT45A7P0DMV0 189 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 MC5RP33032 325 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 CBX3Q13185 183 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 C11orf88Q6PI97 169 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 NRARPQ7Z6K4 114 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 TMED4Q7Z7H5 227 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 CENPSQ8N2Z9 138 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 RTBDNQ9BSG5 229 aaPredicted RBP14.77□□□□□ -0.05
RFFL-211ENST00000584541 C20orf85Q9H1P6 137 aa14.77□□□□□ -0.05
RFFL-211ENST00000584541 C5orf66Q9H5L9 145 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms