RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 LIN54Q6MZP7 749 aa16.05■□□□□ 0.16
SS18-224ENST00000584083 KLHL30-AS1Q8NEE0 82 aa16.05■□□□□ 0.16
SS18-224ENST00000584083 WFDC9Q8NEX5 89 aa16.05■□□□□ 0.16
SS18-224ENST00000584083 NPBQ8NG41 125 aa16.05■□□□□ 0.16
SS18-224ENST00000584083 LGALS14Q8TCE9 139 aa16.05■□□□□ 0.16
SS18-224ENST00000584083 HLA-DRB1P01911 266 aa16.04■□□□□ 0.16
SS18-224ENST00000584083 IGLL1P15814 213 aa16.04■□□□□ 0.16
SS18-224ENST00000584083 C18orf65Q6ZTR6 163 aa16.04■□□□□ 0.16
SS18-224ENST00000584083 C8orf86Q6ZUL3 223 aa16.04■□□□□ 0.16
SS18-224ENST00000584083 GINS4Q9BRT9 223 aa16.04■□□□□ 0.16
SS18-224ENST00000584083 CABLES2Q9BTV7 478 aa16.04■□□□□ 0.16
SS18-224ENST00000584083 CENPOQ9BU64 300 aa16.04■□□□□ 0.16
SS18-224ENST00000584083 PARP11Q9NR21 331 aa16.04■□□□□ 0.16
SS18-224ENST00000584083 ELF5Q9UKW6 265 aaPredicted RBP16.04■□□□□ 0.16
SS18-224ENST00000584083 M0R1X1 148 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 IGF1P05019 195 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 RPLP1P05386 114 aaKnown RBP16.03■□□□□ 0.16
SS18-224ENST00000584083 OR8U9P0C7N5 309 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 OR5H8P0DN80 308 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 FOXE3Q13461 319 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 PLGLAQ15195 96 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 IDNKQ5T6J7 187 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 LCNL1Q6ZST4 164 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 ZNF695Q8IW36 515 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 OR5AN1Q8NGI8 311 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 OR8U1Q8NH10 309 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 OR51J1Q9H342 316 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 FBXL15Q9H469 300 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 VCX3AQ9NNX9 186 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.03■□□□□ 0.16
SS18-224ENST00000584083 RBM7Q9Y580 266 aaKnown RBP16.03■□□□□ 0.16
SS18-224ENST00000584083 WSB1Q9Y6I7 421 aa16.03■□□□□ 0.16
SS18-224ENST00000584083 TRBV6-7A0A0A0MS04 114 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 RRHO14718 337 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 PROP1O75360 226 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 RBBP9O75884 186 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 SCGNO76038 276 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 NDUFA3O95167 84 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 PRB2P02812 416 aaPredicted RBP16.02■□□□□ 0.16
SS18-224ENST00000584083 TFAP2AP05549 437 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 ELANEP08246 267 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 SLC6A1P30531 599 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 SRSF7Q16629 238 aaKnown RBP eCLIP16.02■□□□□ 0.16
SS18-224ENST00000584083 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.02■□□□□ 0.16
SS18-224ENST00000584083 TSPAN14Q8NG11 270 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 ST6GALNAC5Q9BVH7 336 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 TOLLIPQ9H0E2 274 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 OR2D2Q9H210 308 aa16.02■□□□□ 0.16
SS18-224ENST00000584083 A0A087WXM4 84 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 IGHV7-81A0A0B4J1V7 117 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 ATP6V0E1O15342 81 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 TNFAIP8O95379 198 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 DIRAS3O95661 229 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 IGHG4P01861 327 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 APOA2P02652 100 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 DTYMKP23919 212 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 THBS3P49746 956 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 LINC00205P59089 165 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 CFHR3Q02985 330 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 TIMM50Q3ZCQ8 353 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 HACD4Q5VWC8 232 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 ETV3LQ6ZN32 361 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 ZNF383Q8NA42 475 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 RHBDL2Q9NX52 303 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 ZNF580Q9UK33 172 aa16.01■□□□□ 0.15
SS18-224ENST00000584083 IGKV1D-8A0A087WSZ0 117 aa16■□□□□ 0.15
SS18-224ENST00000584083 TMEM235A6NFC5 223 aa16■□□□□ 0.15
SS18-224ENST00000584083 G3V318 75 aa16■□□□□ 0.15
SS18-224ENST00000584083 MYCNOSP40205 109 aa16■□□□□ 0.15
SS18-224ENST00000584083 GNG2P59768 71 aa16■□□□□ 0.15
SS18-224ENST00000584083 PITPNAQ00169 270 aa16■□□□□ 0.15
SS18-224ENST00000584083 Q6ZS49 121 aa16■□□□□ 0.15
SS18-224ENST00000584083 MRPL41Q8IXM3 137 aaKnown RBP16■□□□□ 0.15
SS18-224ENST00000584083 LINC00482Q8N8I6 264 aa16■□□□□ 0.15
SS18-224ENST00000584083 RCC1LQ96I51 464 aaKnown RBP16■□□□□ 0.15
SS18-224ENST00000584083 RNF5Q99942 180 aa16■□□□□ 0.15
SS18-224ENST00000584083 ETV7Q9Y603 341 aa16■□□□□ 0.15
SS18-224ENST00000584083 TRAV41A0A0B4J266 112 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 SCAND1P57086 179 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 RPS16P62249 146 aaKnown RBP15.99■□□□□ 0.15
SS18-224ENST00000584083 TMEM65Q6PI78 240 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 PDPNQ86YL7 162 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 RNF152Q8N8N0 203 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 OR5H6Q8NGV6 325 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 ABHD5Q8WTS1 349 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 NUDCD2Q8WVJ2 157 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 DUX3Q96PT4 197 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 TSNAXQ99598 290 aaKnown RBP15.99■□□□□ 0.15
SS18-224ENST00000584083 SLC35D1Q9NTN3 355 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 NECAP2Q9NVZ3 263 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 SDHAF2Q9NX18 166 aa15.99■□□□□ 0.15
SS18-224ENST00000584083 METTL1Q9UBP6 276 aaKnown RBP15.99■□□□□ 0.15
SS18-224ENST00000584083 AIREO43918 545 aa15.98■□□□□ 0.15
SS18-224ENST00000584083 DUS4LO95620 317 aaKnown RBP15.98■□□□□ 0.15
SS18-224ENST00000584083 IGKV1-16P04430 117 aa15.98■□□□□ 0.15
SS18-224ENST00000584083 CDX1P47902 265 aaPredicted RBP15.98■□□□□ 0.15
SS18-224ENST00000584083 PSG5Q15238 335 aa15.98■□□□□ 0.15
SS18-224ENST00000584083 ZNF260Q3ZCT1 412 aa15.98■□□□□ 0.15
SS18-224ENST00000584083 FOXB2Q5VYV0 432 aa15.98■□□□□ 0.15
SS18-224ENST00000584083 ZNF660Q6AZW8 331 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms