RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 ZNF880Q6PDB4 577 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 KCTD9Q7L273 389 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 CMTM1Q8IZ96 169 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 ZNF561Q8N587 486 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 GCSAMQ8N6F7 178 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 ADAD2Q8NCV1 583 aaKnown RBP8.43□□□□□ -1.06
SS18-221ENST00000582448 PLPPR1Q8TBJ4 325 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 MITD1Q8WV92 249 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 IL1F10Q8WWZ1 152 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 MRGPRFQ96AM1 343 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 MOB3AQ96BX8 217 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 GALMQ96C23 342 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 SNX22Q96L94 193 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 C5orf66Q9H5L9 145 aa8.43□□□□□ -1.06
SS18-221ENST00000582448 A0A0B4J2A0 478 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 MGST3O14880 152 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 SPINT2O43291 252 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 RGS11O94810 467 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 SFT2D2O95562 160 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 LHBP01229 141 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 SCTP09683 121 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 PSG2P11465 335 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 RCC1P18754 421 aaPredicted RBP8.42□□□□□ -1.06
SS18-221ENST00000582448 C4BPBP20851 252 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 AADACP22760 399 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 NFYAP23511 347 aaPredicted RBP8.42□□□□□ -1.06
SS18-221ENST00000582448 CD80P33681 288 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 SRPXP78539 464 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 CYCSP99999 105 aaKnown RBP8.42□□□□□ -1.06
SS18-221ENST00000582448 DHODHQ02127 395 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 FGL1Q08830 312 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 ZNF660Q6AZW8 331 aaPredicted RBP8.42□□□□□ -1.06
SS18-221ENST00000582448 GAPTQ8N292 157 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 OR2T35Q8NGX2 323 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 C22orf15Q8WYQ4 148 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 CYYR1Q96J86 154 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 RTBDNQ9BSG5 229 aaPredicted RBP8.42□□□□□ -1.06
SS18-221ENST00000582448 CABLES2Q9BTV7 478 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 METTL8Q9H825 291 aaKnown RBP8.42□□□□□ -1.06
SS18-221ENST00000582448 TAF9BQ9HBM6 251 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 COMMD9Q9P000 198 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 SHPKQ9UHJ6 478 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 KIF25Q9UIL4 384 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 PPIAL4AQ9Y536 164 aa8.42□□□□□ -1.06
SS18-221ENST00000582448 RBM7Q9Y580 266 aaKnown RBP8.42□□□□□ -1.06
SS18-221ENST00000582448 TRBV6-7A0A0A0MS04 114 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 TRAV38-1A0A0B4J264 116 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 FAM25EA8MYX2 175 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 NPIPB11E5RHQ5 1161 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 CYB5R3P00387 301 aaPredicted RBP8.41□□□□□ -1.06
SS18-221ENST00000582448 IFNA21P01568 189 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 GZMHP20718 246 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 OR3A1P47881 315 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 LUMP51884 338 aaPredicted RBP8.41□□□□□ -1.06
SS18-221ENST00000582448 PIGPP57054 158 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 PAX5Q02548 391 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 AESQ08117 197 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 EDDM3AQ14507 147 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 SLC9A3R2Q15599 337 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 HFEQ30201 348 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 AVPI1Q5T686 147 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 GSG1LQ6UXU4 331 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 PRR18Q8N4B5 295 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 CD177Q8N6Q3 437 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 SECTM1Q8WVN6 248 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 RTN4IP1Q8WWV3 396 aaPredicted RBP8.41□□□□□ -1.06
SS18-221ENST00000582448 SUCNR1Q9BXA5 334 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 SLC5A7Q9GZV3 580 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 FXYD6Q9H0Q3 95 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 FAM234AQ9H0X4 552 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 ZNF665Q9H7R5 613 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 OR6C3Q9NZP0 311 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 OPN4Q9UHM6 478 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 OR2W1Q9Y3N9 320 aa8.41□□□□□ -1.06
SS18-221ENST00000582448 IGKV1D-17A0A075B6S4 117 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 PPIAL4EA0A075B759 164 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 IGHV3OR15-7A0A075B7D8 119 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 C13orf42A0A1B0GVH6 325 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 C5orf51A6NDU8 294 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 CRYM-AS1A6NIL9 109 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 PPIAL4DF5H284 164 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 K7N7A8 449 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 LGALS8O00214 317 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 GPR31O00270 319 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 B3GALNT1O75752 331 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 OR2A4O95047 310 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 LY86O95711 162 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 PPIAL4FP0DN26 164 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 NKX2-5P52952 324 aaPredicted RBP8.4□□□□□ -1.06
SS18-221ENST00000582448 P2RX3P56373 397 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 EDDM3BP56851 147 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 TMEM33P57088 247 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 LMO4P61968 165 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 HMGN3Q15651 99 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 MIDNQ504T8 468 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 TEX36Q5VZQ5 186 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 THNSL2Q86YJ6 484 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 DEFB108BQ8NET1 73 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 OR5M8Q8NGP6 311 aa8.4□□□□□ -1.06
SS18-221ENST00000582448 CCL17Q92583 94 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms