RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 OR8B2Q96RD0 313 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 TP53RKQ96S44 253 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 GPHA2Q96T91 129 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 BPESC1Q9GZL8 116 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 MIOXQ9UGB7 285 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.34□□□□□ -0.758e-11■■■■□ 20.4
SRSF1-204ENST00000581979 CUBNO60494 3623 aa10.34□□□□□ -0.75
SRSF1-204ENST00000581979 ST8SIA5O15466 376 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 IGLV2-14P01704 120 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 ZNF16P17020 682 aaPredicted RBP10.33□□□□□ -0.76
SRSF1-204ENST00000581979 NFYBP25208 207 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 TMEM33P57088 247 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 LOXL3P58215 753 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 TMEM30BQ3MIR4 351 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 TMEM200BQ69YZ2 307 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 PIP4P2Q8N4L2 257 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 ZBTB34Q8NCN2 500 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 NEIL1Q96FI4 390 aaPredicted RBP10.33□□□□□ -0.76
SRSF1-204ENST00000581979 SEC22AQ96IW7 307 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 HYLS1Q96M11 299 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 ZNF714Q96N38 554 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 GFOD1Q9NXC2 390 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 PSG11Q9UQ72 335 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 IFNA21P01568 189 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 F2RP25116 425 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 GPR6P46095 362 aaPredicted RBP10.33□□□□□ -0.76
SRSF1-204ENST00000581979 SRPXP78539 464 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 PRAMEF5Q5TYX0 476 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 DRAM1Q8N682 238 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 OR51H1Q8NH63 302 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 GLYATL2Q8WU03 294 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 MSI2Q96DH6 328 aaKnown RBP10.33□□□□□ -0.76
SRSF1-204ENST00000581979 COMMD9Q9P000 198 aa10.33□□□□□ -0.76
SRSF1-204ENST00000581979 RNF212BA8MTL3 300 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 H0Y980 276 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 IGHV3-7P01780 117 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 CCL3L1P16619 93 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 GPR12P47775 334 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 SRSF4Q08170 494 aaKnown RBP10.32□□□□□ -0.76
SRSF1-204ENST00000581979 MSMO1Q15800 293 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 Q5BKY6 102 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 TMEM268Q5VZI3 342 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 ZNF695Q8IW36 515 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 LRTM2Q8N967 370 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 OR10A7Q8NGE5 316 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 FAM216AQ8WUB2 273 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 LEAP2Q969E1 77 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 ABHD14BQ96IU4 210 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 TMEM222Q9H0R3 208 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 LINC00574Q9H8X3 128 aa10.32□□□□□ -0.76
SRSF1-204ENST00000581979 TRBV23-1A0A0A0MS06 115 aa10.31□□□□□ -0.76
SRSF1-204ENST00000581979 GPR37O15354 613 aa10.31□□□□□ -0.76
SRSF1-204ENST00000581979 B3GALNT1O75752 331 aa10.31□□□□□ -0.76
SRSF1-204ENST00000581979 GGNBP1Q5YKI7 109 aa10.31□□□□□ -0.76
SRSF1-204ENST00000581979 ZNF841Q6ZN19 808 aa10.31□□□□□ -0.76
SRSF1-204ENST00000581979 OR52M1Q8NGK5 317 aa10.31□□□□□ -0.76
SRSF1-204ENST00000581979 C2orf50Q96LR7 162 aa10.31□□□□□ -0.76
SRSF1-204ENST00000581979 ABHD14AQ9BUJ0 271 aa10.31□□□□□ -0.76
SRSF1-204ENST00000581979 NARFLQ9H6Q4 476 aa10.31□□□□□ -0.76
SRSF1-204ENST00000581979 LIN7CQ9NUP9 197 aaKnown RBP10.31□□□□□ -0.76
SRSF1-204ENST00000581979 MPTX1A8MV57 137 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 G3V3Q6 166 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 ITGB1BP1O14713 200 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 MMP23AO75900 390 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 WNT2P09544 360 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 UCP1P25874 307 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 GNG10P50151 68 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 RAB7AP51149 207 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 CYCSP99999 105 aaKnown RBP10.3□□□□□ -0.76
SRSF1-204ENST00000581979 FGL1Q08830 312 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 CATR1Q13166 79 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 Q3ZCU0 254 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 BTNL3Q6UXE8 466 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 LYZL2Q7Z4W2 148 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 OR11H4Q8NGC9 324 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 GRPEL2Q8TAA5 225 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 LHFPL5Q8TAF8 219 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 RAB39BQ96DA2 213 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 TMEM56Q96MV1 263 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 NMES1Q9C002 83 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 PATZ1Q9HBE1 687 aaKnown RBP10.3□□□□□ -0.76
SRSF1-204ENST00000581979 SDHAF2Q9NX18 166 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 RPUSD1Q9UJJ7 312 aaKnown RBP10.3□□□□□ -0.76
SRSF1-204ENST00000581979 TMEM56-RWDD3S4R434 201 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 STAB1Q9NY15 2570 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 SVEP1Q4LDE5 3571 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 A0A1W2PPE3 182 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 A0A1W2PPH5 198 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 SLC31A2O15432 143 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 SERPINE2P07093 398 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 ZNF134P52741 427 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 ERVFRD-1P60508 538 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 GNB2P62879 340 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 LRRC37A5PQ49AS3 106 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 WDR25Q64LD2 544 aaPredicted RBP10.3□□□□□ -0.76
SRSF1-204ENST00000581979 HEPN1Q6WQI6 88 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 SELENOHQ8IZQ5 122 aaKnown RBP10.3□□□□□ -0.76
SRSF1-204ENST00000581979 SLC35G3Q8N808 338 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 C5orf30Q96GV9 206 aa10.3□□□□□ -0.76
SRSF1-204ENST00000581979 C1orf159Q96HA4 380 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms