RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 ZNF580Q9UK33 172 aa15.31■□□□□ 0.04
SREBF1-220ENST00000581707 WASHC3Q9Y3C0 194 aa15.31■□□□□ 0.04
SREBF1-220ENST00000581707 PROP1O75360 226 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 NDUFA3O95167 84 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 DIRAS3O95661 229 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 HLA-DRB1P01911 266 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 RPLP1P05386 114 aaKnown RBP15.3■□□□□ 0.04
SREBF1-220ENST00000581707 GSTP1P09211 210 aaKnown RBP15.3■□□□□ 0.04
SREBF1-220ENST00000581707 OR5H8P0DN80 308 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 SNRPBP14678 240 aaKnown RBP15.3■□□□□ 0.04
SREBF1-220ENST00000581707 CFHR3Q02985 330 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 MXD1Q05195 221 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 CDNFQ49AH0 187 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 LIN54Q6MZP7 749 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 C8orf86Q6ZUL3 223 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 ZNF695Q8IW36 515 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 DRAXINQ8NBI3 349 aaPredicted RBP15.3■□□□□ 0.04
SREBF1-220ENST00000581707 OR10J5Q8NHC4 309 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 MAFIPQ8WZ33 124 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 CABLES2Q9BTV7 478 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 TOLLIPQ9H0E2 274 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 RNF167Q9H6Y7 350 aa15.3■□□□□ 0.04
SREBF1-220ENST00000581707 PRKDCP78527 4128 aaKnown RBP15.29■□□□□ 0.04
SREBF1-220ENST00000581707 TRBV6-7A0A0A0MS04 114 aa15.29■□□□□ 0.04
SREBF1-220ENST00000581707 IGHG4P01861 327 aa15.29■□□□□ 0.04
SREBF1-220ENST00000581707 PRB2P02812 416 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-220ENST00000581707 ELANEP08246 267 aa15.29■□□□□ 0.04
SREBF1-220ENST00000581707 CLEC2LP0C7M8 214 aa15.29■□□□□ 0.04
SREBF1-220ENST00000581707 THBS3P49746 956 aa15.29■□□□□ 0.04
SREBF1-220ENST00000581707 SRSF7Q16629 238 aaKnown RBP eCLIP15.29■□□□□ 0.04
SREBF1-220ENST00000581707 ETV3LQ6ZN32 361 aa15.29■□□□□ 0.04
SREBF1-220ENST00000581707 Q6ZS49 121 aa15.29■□□□□ 0.04
SREBF1-220ENST00000581707 LCNL1Q6ZST4 164 aa15.29■□□□□ 0.04
SREBF1-220ENST00000581707 RNF152Q8N8N0 203 aa15.29■□□□□ 0.04
SREBF1-220ENST00000581707 OR51J1Q9H342 316 aa15.29■□□□□ 0.04
SREBF1-220ENST00000581707 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.29■□□□□ 0.04
SREBF1-220ENST00000581707 ELF5Q9UKW6 265 aaPredicted RBP15.29■□□□□ 0.04
SREBF1-220ENST00000581707 IGHV7-81A0A0B4J1V7 117 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 RRHO14718 337 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 RBBP9O75884 186 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 TFAP2AP05549 437 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 OR8U9P0C7N5 309 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 MRPL41Q8IXM3 137 aaKnown RBP15.28■□□□□ 0.04
SREBF1-220ENST00000581707 LINC00482Q8N8I6 264 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.28■□□□□ 0.04
SREBF1-220ENST00000581707 OR8U1Q8NH10 309 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 LGALS14Q8TCE9 139 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 RCC1LQ96I51 464 aaKnown RBP15.28■□□□□ 0.04
SREBF1-220ENST00000581707 RNF5Q99942 180 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 CENPOQ9BU64 300 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 PARP11Q9NR21 331 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 WSB1Q9Y6I7 421 aa15.28■□□□□ 0.04
SREBF1-220ENST00000581707 M0R1X1 148 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 ATP6V0E1O15342 81 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 SCGNO76038 276 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 DTYMKP23919 212 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 MYCNOSP40205 109 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 LINC00205P59089 165 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 PLGLAQ15195 96 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 HACD4Q5VWC8 232 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 REC114Q7Z4M0 266 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 ZNF383Q8NA42 475 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 GINS4Q9BRT9 223 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 FBXL15Q9H469 300 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 NECAP2Q9NVZ3 263 aa15.27■□□□□ 0.04
SREBF1-220ENST00000581707 G3V318 75 aa15.26■□□□□ 0.03
SREBF1-220ENST00000581707 DUS4LO95620 317 aaKnown RBP15.26■□□□□ 0.03
SREBF1-220ENST00000581707 APOA2P02652 100 aa15.26■□□□□ 0.03
SREBF1-220ENST00000581707 PSMB8P28062 276 aa15.26■□□□□ 0.03
SREBF1-220ENST00000581707 CDX1P47902 265 aaPredicted RBP15.26■□□□□ 0.03
SREBF1-220ENST00000581707 IDNKQ5T6J7 187 aa15.26■□□□□ 0.03
SREBF1-220ENST00000581707 FOXB2Q5VYV0 432 aa15.26■□□□□ 0.03
SREBF1-220ENST00000581707 TSPAN14Q8NG11 270 aa15.26■□□□□ 0.03
SREBF1-220ENST00000581707 ST6GALNAC5Q9BVH7 336 aa15.26■□□□□ 0.03
SREBF1-220ENST00000581707 OR2D2Q9H210 308 aa15.26■□□□□ 0.03
SREBF1-220ENST00000581707 RHBDL2Q9NX52 303 aa15.26■□□□□ 0.03
SREBF1-220ENST00000581707 GAB2Q9UQC2 676 aa15.26■□□□□ 0.03
SREBF1-220ENST00000581707 IGKV1D-8A0A087WSZ0 117 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 A0A087WXM4 84 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 TRAV41A0A0B4J266 112 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 CCL24O00175 119 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 FCN1O00602 326 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 IGKV1-16P04430 117 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 PPIFP30405 207 aaKnown RBP15.25■□□□□ 0.03
SREBF1-220ENST00000581707 SCAND1P57086 179 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 RPS16P62249 146 aaKnown RBP15.25■□□□□ 0.03
SREBF1-220ENST00000581707 CX3CL1P78423 397 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 PITPNAQ00169 270 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 ZNF260Q3ZCT1 412 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 ZNF660Q6AZW8 331 aaPredicted RBP15.25■□□□□ 0.03
SREBF1-220ENST00000581707 PDPNQ86YL7 162 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 P2RX4Q99571 388 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 TSNAXQ99598 290 aaKnown RBP15.25■□□□□ 0.03
SREBF1-220ENST00000581707 DCSTAMPQ9H295 470 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 VCX3AQ9NNX9 186 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 SDHAF2Q9NX18 166 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 RBM7Q9Y580 266 aaKnown RBP15.25■□□□□ 0.03
SREBF1-220ENST00000581707 ETV7Q9Y603 341 aa15.25■□□□□ 0.03
SREBF1-220ENST00000581707 TMEM235A6NFC5 223 aa15.24■□□□□ 0.03
SREBF1-220ENST00000581707 TNFAIP8O95379 198 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms