RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PLCZ1Q86YW0 608 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ZBTB8OSQ8IWT0 167 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 IQCF2Q8IXL9 164 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 Q8N402 240 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 LFNGQ8NES3 379 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 OR5L1Q8NGL2 311 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 OR4P4Q8NGL7 312 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 STOML3Q8TAV4 291 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 GALMQ96C23 342 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ARL5BQ96KC2 179 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 RBP7Q96R05 134 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 TBX5Q99593 518 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 Q9BRP9 147 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 ZNF426Q9BUY5 554 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 EIF5A2Q9GZV4 153 aaKnown RBP0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 METTL9Q9H1A3 318 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 DMAC2Q9NW81 257 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 MS4A12Q9NXJ0 267 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 USE1Q9NZ43 259 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 TMEM216Q9P0N5 145 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 MRPS16Q9Y3D3 137 aaKnown RBP0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 FIS1Q9Y3D6 152 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 SLX4Q8IY92 1834 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 KIF13BQ9NQT8 1826 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 PTPRJQ12913 1337 aa0.61□□□□□ -2.31
SMCHD1-206ENST00000581631 NCKAP5O14513 1909 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 GREB1Q4ZG55 1949 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 RTTNQ86VV8 2226 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 THSD7AQ9UPZ6 1657 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 SIPA1L1O43166 1804 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 C1orf232A0A0U1RR37 186 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 A0A1B0GVG6 124 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 DAPL1A0PJW8 107 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 ARRDC5A6NEK1 342 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 M0QYV0 167 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 SLC16A4O15374 487 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 SSNA1O43805 119 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 HPGDSO60760 199 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 E2F6O75461 281 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 CRYBA1P05813 215 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 ESDP10768 282 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 NQO1P15559 274 aaKnown RBP0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 MYL12AP19105 171 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 CD40LGP29965 261 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 DDTP30046 118 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 AGTR1P30556 359 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 MAGEA2P43356 314 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 LPAR6P43657 344 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 DAPP51397 102 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 TSPEAR-AS2P59090 65 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 SKP1P63208 163 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 BTN3A2P78410 334 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 ZNHIT3Q15649 155 aaPredicted RBP0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 LRRC26Q2I0M4 334 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 TRMT12Q53H54 448 aaKnown RBP0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 MESTQ5EB52 335 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 KIAA2026Q5HYC2 2103 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 TIMM23BQ5SRD1 257 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 HENMT1Q5T8I9 393 aaKnown RBP0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 FAM151BQ6UXP7 276 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 CD302Q8IX05 232 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 PACRGLQ8N7B6 248 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 OR11H1Q8NG94 326 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 OR4X2Q8NGF9 303 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 JOSD2Q8TAC2 188 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 C10orf105Q8TEF2 133 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 TAMM41Q96BW9 452 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 SMIM19Q96E16 107 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 TMA16Q96EY4 203 aaKnown RBP0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 ZNF514Q96K75 400 aaPredicted RBP0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 TMEM56Q96MV1 263 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 DHRS9Q9BPW9 319 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 C7orf50Q9BRJ6 194 aaKnown RBP0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 PECRQ9BY49 303 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 CHST5Q9GZS9 411 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 DRC3Q9H069 523 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 GTSF1LQ9H1H1 148 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 OR51B6Q9H340 312 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 PARVGQ9HBI0 331 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 TXNL4BQ9NX01 149 aaKnown RBP0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 NDUFB11Q9NX14 153 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 GLS2Q9UI32 602 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 SCML1Q9UN30 329 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 C15orf41Q9Y2V0 281 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 ATP6V1DQ9Y5K8 247 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 SNX10Q9Y5X0 201 aa0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 MDC1Q14676 2089 aaKnown RBP0.6□□□□□ -2.31
SMCHD1-206ENST00000581631 SCN9AQ15858 1988 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 PCDH15Q96QU1 1955 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 A0A1W2PP64 1363 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 ABCC11Q96J66 1382 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 RALGAPA2Q2PPJ7 1873 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 C9orf84Q5VXU9 1444 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 IGHV3-73A0A0B4J1V6 119 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 TEX50A0A1B0GTY4 177 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 A0A1B0GW54 56 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 METTL15A6NJ78 407 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 C11orf86A6NJI1 115 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 GOLGA8KD6RF30 607 aa0.59□□□□□ -2.31
SMCHD1-206ENST00000581631 GOLGA8MH3BSY2 632 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 492.8 ms