RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 AKR1C2P52895 323 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 CCL23P55773 120 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 TPPP2P59282 170 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 SNRPD2P62316 118 aaKnown RBP3.19□□□□□ -1.9
SMG8-205ENST00000580798 UBA52P62987 128 aaKnown RBP3.19□□□□□ -1.9
SMG8-205ENST00000580798 GRB2P62993 217 aaKnown RBP3.19□□□□□ -1.9
SMG8-205ENST00000580798 DEFA5Q01523 94 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 ZNF85Q03923 595 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 ARFRP1Q13795 201 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 JOSD1Q15040 202 aaPredicted RBP3.19□□□□□ -1.9
SMG8-205ENST00000580798 P2RY6Q15077 328 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 PAFAH1B3Q15102 231 aaKnown RBP3.19□□□□□ -1.9
SMG8-205ENST00000580798 PEA15Q15121 130 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 MMDQ15546 238 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 IQCJQ1A5X6 159 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 CCSMST1Q4G0I0 132 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 FAAP20Q6NZ36 180 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 FOXL2NBQ6ZUU3 175 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 FER1L6-AS1Q8NA97 138 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 OR2M3Q8NG83 312 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 OR4S1Q8NGB4 309 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 OR8B12Q8NGG6 310 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 SRSF12Q8WXF0 261 aaKnown RBP3.19□□□□□ -1.9
SMG8-205ENST00000580798 MAGOHBQ96A72 148 aaKnown RBP3.19□□□□□ -1.9
SMG8-205ENST00000580798 GALNT14Q96FL9 552 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 LINC00052Q96N35 136 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 IP6K3Q96PC2 410 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 TSPAN32Q96QS1 320 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 HSD17B10Q99714 261 aaKnown RBP3.19□□□□□ -1.9
SMG8-205ENST00000580798 NRTNQ99748 197 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 THTPAQ9BU02 230 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 C1QTNF6Q9BXI9 259 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 EIF5A2Q9GZV4 153 aaKnown RBP3.19□□□□□ -1.9
SMG8-205ENST00000580798 SLC25A31Q9H0C2 315 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 TMEM222Q9H0R3 208 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 TCEAL2Q9H3H9 227 aaPredicted RBP3.19□□□□□ -1.9
SMG8-205ENST00000580798 PARP11Q9NR21 331 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 SMCO4Q9NRQ5 59 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 KCNIP2Q9NS61 270 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 BET1LQ9NYM9 111 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 PCYOX1Q9UHG3 505 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 SHPKQ9UHJ6 478 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 VAX2Q9UIW0 290 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 MED31Q9Y3C7 131 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 NALCNQ8IZF0 1738 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 OVOS2A0A0G2JMS6 1433 aa3.19□□□□□ -1.9
SMG8-205ENST00000580798 POLA1P09884 1462 aaPredicted RBP3.18□□□□□ -1.9
SMG8-205ENST00000580798 IGLV3-22A0A075B6J6 115 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 hDV102S1A0JD36 115 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 G3V3Q6 166 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 CDC42EP2O14613 210 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 PDCD5O14737 125 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 OVOL1O14753 267 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 EDIL3O43854 480 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 DEDDO75618 318 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 CDK2AP2O75956 126 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 AIFM1O95831 613 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 IGHG2P01859 326 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 HLA-DRB1P01911 266 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 ATP5G1P05496 136 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 IGKV5-2P06315 115 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 OR9G9P0C7N8 305 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 OR12D1P0DN82 309 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 CTLA4P16410 223 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 ZNF19P17023 458 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 PPIBP23284 216 aaKnown RBP3.18□□□□□ -1.9
SMG8-205ENST00000580798 TGFBR1P36897 503 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 RBMXP38159 391 aaKnown RBP3.18□□□□□ -1.9
SMG8-205ENST00000580798 CXCL12P48061 93 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 UBE2NP61088 152 aaKnown RBP3.18□□□□□ -1.9
SMG8-205ENST00000580798 HLA-DRB3P79483 266 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 DCDP81605 110 aaKnown RBP3.18□□□□□ -1.9
SMG8-205ENST00000580798 PSG7Q13046 419 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 SRSF9Q13242 221 aaKnown RBP eCLIP3.18□□□□□ -1.9
SMG8-205ENST00000580798 TGIF1Q15583 401 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 GSG1Q2KHT4 349 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 TMEM30BQ3MIR4 351 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 PRR30Q53SZ7 412 aaPredicted RBP3.18□□□□□ -1.9
SMG8-205ENST00000580798 GLYATL3Q5SZD4 288 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 TSPO2Q5TGU0 170 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 SPATA31B1PQ5VZV4 182 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 ZNF705AQ6ZN79 300 aaPredicted RBP3.18□□□□□ -1.9
SMG8-205ENST00000580798 PIANPQ8IYJ0 282 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 CIARTQ8N365 385 aaPredicted RBP3.18□□□□□ -1.9
SMG8-205ENST00000580798 DEFB125Q8N687 156 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 TEX29Q8N6K0 151 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 ZNF433Q8N7K0 673 aaPredicted RBP3.18□□□□□ -1.9
SMG8-205ENST00000580798 OR2T6Q8NHC8 308 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 RFESDQ8TAC1 157 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 STARD4Q96DR4 205 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 C9orf85Q96MD7 179 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 OR4C12Q96R67 309 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 NMNAT3Q96T66 252 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 MIEN1Q9BRT3 115 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 GFRA4Q9GZZ7 299 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 PLEKHA3Q9HB20 300 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 SCRT2Q9NQ03 307 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 CCDC167Q9P0B6 97 aa3.18□□□□□ -1.9
SMG8-205ENST00000580798 NOP16Q9Y3C1 178 aaKnown RBP3.18□□□□□ -1.9
SMG8-205ENST00000580798 TCOF1Q13428 1488 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms