RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 CD28P10747 220 aa12.96□□□□□ -0.33
RARA-209ENST00000579727 NFYAP23511 347 aaPredicted RBP12.96□□□□□ -0.33
RARA-209ENST00000579727 RPL5P46777 297 aaKnown RBP12.96□□□□□ -0.33
RARA-209ENST00000579727 MMDQ15546 238 aa12.96□□□□□ -0.33
RARA-209ENST00000579727 FAM71F2Q6NXP2 309 aa12.96□□□□□ -0.33
RARA-209ENST00000579727 H1FOOQ8IZA3 346 aaPredicted RBP12.96□□□□□ -0.33
RARA-209ENST00000579727 BEST4Q8NFU0 473 aa12.96□□□□□ -0.33
RARA-209ENST00000579727 C5orf30Q96GV9 206 aa12.96□□□□□ -0.33
RARA-209ENST00000579727 WNT10AQ9GZT5 417 aa12.96□□□□□ -0.33
RARA-209ENST00000579727 TOLLIPQ9H0E2 274 aa12.96□□□□□ -0.33
RARA-209ENST00000579727 PLSCR3Q9NRY6 295 aa12.96□□□□□ -0.33
RARA-209ENST00000579727 ANXA10Q9UJ72 324 aa12.96□□□□□ -0.33
RARA-209ENST00000579727 LINC00527Q9UJ94 153 aa12.96□□□□□ -0.33
RARA-209ENST00000579727 ELK1P19419 428 aa12.95□□□□□ -0.34
RARA-209ENST00000579727 ARPC4P59998 168 aa12.95□□□□□ -0.34
RARA-209ENST00000579727 ACTBP60709 375 aa12.95□□□□□ -0.34
RARA-209ENST00000579727 C10orf99Q6UWK7 81 aa12.95□□□□□ -0.34
RARA-209ENST00000579727 HOGA1Q86XE5 327 aa12.95□□□□□ -0.34
RARA-209ENST00000579727 SGMS2Q8NHU3 365 aa12.95□□□□□ -0.34
RARA-209ENST00000579727 ACOT12Q8WYK0 555 aa12.95□□□□□ -0.34
RARA-209ENST00000579727 MRPS7Q9Y2R9 242 aaKnown RBP12.95□□□□□ -0.34
RARA-209ENST00000579727 LINC01548A6NM66 108 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 FAM25AB3EWG3 89 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 FAM25CB3EWG5 89 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 FAM25GB3EWG6 89 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 H0YJW9 148 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 H7C2Y5 167 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 DIRAS3O95661 229 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 ZNF182P17025 639 aaPredicted RBP12.94□□□□□ -0.34
RARA-209ENST00000579727 CNIH2Q6PI25 160 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 ZNF383Q8NA42 475 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 RAB2BQ8WUD1 216 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 AP3S1Q92572 193 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 SNAPC3Q92966 411 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 NOL4LQ96MY1 436 aaPredicted RBP12.94□□□□□ -0.34
RARA-209ENST00000579727 RASL11BQ9BPW5 248 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 IFT46Q9NQC8 304 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 SDHAF2Q9NX18 166 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 SCOCQ9UIL1 159 aa12.94□□□□□ -0.34
RARA-209ENST00000579727 NOL3O60936 208 aaKnown RBP12.93□□□□□ -0.34
RARA-209ENST00000579727 FBXO24O75426 580 aa12.93□□□□□ -0.34
RARA-209ENST00000579727 APOA1P02647 267 aa12.93□□□□□ -0.34
RARA-209ENST00000579727 RNASE12Q5GAN4 147 aaKnown RBP12.93□□□□□ -0.34
RARA-209ENST00000579727 MZT2AQ6P582 158 aa12.93□□□□□ -0.34
RARA-209ENST00000579727 SLC35E3Q7Z769 313 aa12.93□□□□□ -0.34
RARA-209ENST00000579727 CENPVQ7Z7K6 275 aaPredicted RBP12.93□□□□□ -0.34
RARA-209ENST00000579727 SNX29P2Q8IUI4 249 aa12.93□□□□□ -0.34
RARA-209ENST00000579727 FAM71E2Q8N5Q1 922 aa12.93□□□□□ -0.34
RARA-209ENST00000579727 HSPB9Q9BQS6 159 aa12.93□□□□□ -0.34
RARA-209ENST00000579727 GHITMQ9H3K2 345 aa12.93□□□□□ -0.34
RARA-209ENST00000579727 LIN7CQ9NUP9 197 aaKnown RBP12.93□□□□□ -0.34
RARA-209ENST00000579727 IGKV1D-13A0A0B4J2D9 117 aa12.92□□□□□ -0.34
RARA-209ENST00000579727 OR5H14A6NHG9 310 aa12.92□□□□□ -0.34
RARA-209ENST00000579727 H3BMQ9 156 aa12.92□□□□□ -0.34
RARA-209ENST00000579727 NBR2O15453 112 aa12.92□□□□□ -0.34
RARA-209ENST00000579727 TSPAN15O95858 294 aa12.92□□□□□ -0.34
RARA-209ENST00000579727 IGKV1-13P0DP09 117 aa12.92□□□□□ -0.34
RARA-209ENST00000579727 TMBIM6P55061 237 aa12.92□□□□□ -0.34
RARA-209ENST00000579727 OR5AU1Q8NGC0 362 aa12.92□□□□□ -0.34
RARA-209ENST00000579727 WIPF2Q8TF74 440 aaPredicted RBP12.92□□□□□ -0.34
RARA-209ENST00000579727 ISOC1Q96CN7 298 aa12.92□□□□□ -0.34
RARA-209ENST00000579727 WASHC3Q9Y3C0 194 aa12.92□□□□□ -0.34
RARA-209ENST00000579727 M0QZ24 198 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 IGHG2P01859 326 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 HLA-DQB1P01920 261 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 APOA2P02652 100 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 IGKV1-16P04430 117 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 CTXN2P0C2S0 81 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 PRSS3P35030 304 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 SOX6P35712 828 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 CBX5P45973 191 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 LUMP51884 338 aaPredicted RBP12.91□□□□□ -0.34
RARA-209ENST00000579727 NSUN5P1Q3KNT7 163 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 ZNF329Q86UD4 541 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.91□□□□□ -0.34
RARA-209ENST00000579727 OR8H1Q8NGG4 311 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 OR5AN1Q8NGI8 311 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 DYNC2LI1Q8TCX1 351 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 CITED2Q99967 270 aaPredicted RBP12.91□□□□□ -0.34
RARA-209ENST00000579727 FBXL15Q9H469 300 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 SLC35D1Q9NTN3 355 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 EXTL2Q9UBQ6 330 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 OR2W1Q9Y3N9 320 aa12.91□□□□□ -0.34
RARA-209ENST00000579727 SMIM31A0A1B0GVY4 71 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 A0A1W2PRX2 142 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 PSMB11A5LHX3 300 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 CCDC160A6NGH7 325 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 RGS5O15539 181 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 AADACP22760 399 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 FCGR2CP31995 323 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 MC5RP33032 325 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 PRR31Q5SQ13 230 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 LAX1Q8IWV1 398 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 BVESQ8NE79 360 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 CMTM3Q96MX0 182 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 MIXL1Q9H2W2 232 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 NECAP2Q9NVZ3 263 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 KIAA1456Q9P272 454 aa12.9□□□□□ -0.34
RARA-209ENST00000579727 ZNF107Q9UII5 783 aaPredicted RBP12.9□□□□□ -0.34
RARA-209ENST00000579727 CEPT1Q9Y6K0 416 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms