RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 DCUN1D4Q92564 292 aa7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 ARHGAP5-AS1Q96IT6 56 aa7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 MS4A10Q96PG2 267 aa7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 GFI1Q99684 422 aa7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 CMSS1Q9BQ75 279 aaKnown RBP7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 RIMS4Q9H426 269 aaPredicted RBP7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 C12orf4Q9NQ89 552 aa7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 METTL1Q9UBP6 276 aaKnown RBP7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 ZNF221Q9UK13 617 aa7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 MGAT4AQ9UM21 535 aa7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 FOXA2Q9Y261 457 aaPredicted RBP7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 LSM4Q9Y4Z0 139 aaKnown RBP7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 U3KQK5 164 aa7.15□□□□□ -1.26
CDK5RAP3-211ENST00000578996 IGHV4OR15-8A0A075B7B6 117 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 A0A087WW49 117 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 LINC01619G3V211 115 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 SOX15O60248 233 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 CA2P00918 260 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 APOA2P02652 100 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 NHLRC4P0CG21 123 aaPredicted RBP7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 CD40LGP29965 261 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 MAP2K4P45985 399 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 INSL3P51460 131 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 LINC00205P59089 165 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TPPP2P59282 170 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 RUNX1Q01196 453 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TMEM267Q0VDI3 215 aaPredicted RBP7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TRAM1Q15629 374 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 ACTBL2Q562R1 376 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 HES5Q5TA89 166 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 UNQ5815/PRO19632Q6UWF5 114 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TMEM91Q6ZNR0 172 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 PPP1R27Q86WC6 154 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TCTEX1D1Q8N7M0 179 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 LFNGQ8NES3 379 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 GRPEL2Q8TAA5 225 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 DLX4Q92988 240 aaPredicted RBP7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 PECRQ9BY49 303 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 C11orf54Q9H0W9 315 aaPredicted RBP7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 GHITMQ9H3K2 345 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 Q9N2K0 584 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 ZNF355PQ9NSJ1 428 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 GAB2Q9UQC2 676 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 SMAD5-AS1Q9Y6J3 95 aa7.14□□□□□ -1.27
CDK5RAP3-211ENST00000578996 KMT2CQ8NEZ4 4911 aaKnown RBP7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 A0A075B6Q4 140 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TRBV6-6A0A0A6YYG2 114 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 M0R1X1 148 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 BET1O15155 118 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 DENRO43583 198 aaKnown RBP7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 RBBP9O75884 186 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 IGKV1-16P04430 117 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TFAP2AP05549 437 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 LGALS1P09382 135 aaKnown RBP7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 SNRPBP14678 240 aaKnown RBP7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 PSMA1P25786 263 aaKnown RBP7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 HSPA13P48723 471 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TMEM50BP56557 158 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 FABP5Q01469 135 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 MLLT11Q13015 90 aaPredicted RBP7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 IRF3Q14653 427 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 PSG5Q15238 335 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 C2orf76Q3KRA6 126 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 PYHIN1Q6K0P9 492 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 ZNF429Q86V71 674 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 OR56B1Q8NGI3 324 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 OR5AN1Q8NGI8 311 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 ARPC1AQ92747 370 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 FAM3DQ96BQ1 224 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TSNAXQ99598 290 aaKnown RBP7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 AGMATQ9BSE5 352 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TOLLIPQ9H0E2 274 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 RDH8Q9NYR8 311 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 HSF4Q9ULV5 492 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 V9GY05 133 aa7.13□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TMEM272A0A1B0GTI8 110 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 FOXI3A8MTJ6 420 aaPredicted RBP7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TRDCB7Z8K6 153 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 ITGB1BP1O14713 200 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 SLC25A17O43808 307 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 CNIH1O95406 144 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TRGV3P03979 118 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 CD3GP09693 182 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 EGR2P11161 476 aaPredicted RBP7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 SPNP16150 400 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 CRIP2P52943 208 aaPredicted RBP7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 PITPNAQ00169 270 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 PLA2G7Q13093 441 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 TPBGQ13641 420 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 FXYD3Q14802 87 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 SRSF7Q16629 238 aaKnown RBP eCLIP7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 C19orf54Q5BKX5 351 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 PLAC9Q5JTB6 97 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 OVCH2Q7RTZ1 564 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 PDPNQ86YL7 162 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 FAM89BQ8N5H3 189 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 ZNF383Q8NA42 475 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 MAFIPQ8WZ33 124 aa7.12□□□□□ -1.27
CDK5RAP3-211ENST00000578996 FLYWCH2Q96CP2 140 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms