RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 RNF150Q9ULK6 438 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 AMMECR1Q9Y4X0 333 aaPredicted RBP10.97□□□□□ -0.65
SRSF1-202ENST00000578430 INSIG2Q9Y5U4 225 aa10.97□□□□□ -0.65
SRSF1-202ENST00000578430 IGHV2-26A0A0B4J1V2 119 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 SLC31A2O15432 143 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 F2RP25116 425 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 GNG10P50151 68 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 ZNF137PP52743 207 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 RRAS2P62070 204 aaPredicted RBP10.96□□□□□ -0.65
SRSF1-202ENST00000578430 SUPT4H1P63272 117 aaKnown RBP10.96□□□□□ -0.65
SRSF1-202ENST00000578430 PAX8Q06710 450 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 CATR1Q13166 79 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 EIF4EBP1Q13541 118 aaPredicted RBP10.96□□□□□ -0.65
SRSF1-202ENST00000578430 TBC1D26Q86UD7 250 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 KRTAP1-3Q8IUG1 177 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 C12orf45Q8N5I9 185 aaPredicted RBP10.96□□□□□ -0.65
SRSF1-202ENST00000578430 LINC01356Q8N9X3 169 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 OR11H6Q8NGC7 330 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 OR10X1Q8NGY0 326 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 COQ8AQ8NI60 647 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 LEAP2Q969E1 77 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 TMEM186Q96B77 213 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 ABHD14BQ96IU4 210 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 ADTRPQ96IZ2 230 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 Q96MF0 132 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 MED28Q9H204 178 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 LIN7CQ9NUP9 197 aaKnown RBP10.96□□□□□ -0.65
SRSF1-202ENST00000578430 SDHAF2Q9NX18 166 aa10.96□□□□□ -0.65
SRSF1-202ENST00000578430 CCDC168Q8NDH2 2452 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 C3orf85A0A1B0GTC6 90 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 HMX3A6NHT5 357 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 H0Y980 276 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 SSNA1O43805 119 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 TOX4O94842 621 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 IGLV1-47P01700 117 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 MMP9P14780 707 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 GZMKP49863 264 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 LYG1Q8N1E2 194 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 OR52B4Q8NGK2 314 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 MMP26Q9NRE1 261 aa10.95□□□□□ -0.66
SRSF1-202ENST00000578430 SETD2Q9BYW2 2564 aaPredicted RBP10.95□□□□□ -0.66
SRSF1-202ENST00000578430 SAA2-SAA4A0A096LPE2 208 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 RNF223E7ERA6 249 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 IGHV3-7P01780 117 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 SAA2P0DJI9 122 aaPredicted RBP10.94□□□□□ -0.66
SRSF1-202ENST00000578430 UCP1P25874 307 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 KIR2DS2P43631 304 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 THBS3P49746 956 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 TAGLNQ01995 201 aaKnown RBP10.94□□□□□ -0.66
SRSF1-202ENST00000578430 TMEM187Q14656 261 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 HLA-DRB5Q30154 266 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 UTF1Q5T230 341 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 DCAF12L2Q5VW00 463 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 LIAT1Q6ZQX7 453 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 ZNF833PQ6ZTB9 187 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 VMO1Q7Z5L0 202 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 ODF3L1Q8IXM7 274 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 LRTM2Q8N967 370 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 CD300LFQ8TDQ1 290 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 CASTOR1Q8WTX7 329 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 IL22RA2Q969J5 263 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 TMEM222Q9H0R3 208 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 PRELID3BQ9Y3B1 194 aa10.94□□□□□ -0.66
SRSF1-202ENST00000578430 A0A1W2PPE3 182 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 DUXBA0A1W2PPF3 345 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 J3QLI3 93 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 M0R1X1 148 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 TXNL1O43396 289 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 TNFSF12O43508 249 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 OR5AC1P0C628 307 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 SULT1A3P0DMM9 295 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 SULT1A4P0DMN0 295 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 RPA2P15927 270 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 HLA-GP17693 338 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 DUTP33316 252 aaKnown RBP10.93□□□□□ -0.66
SRSF1-202ENST00000578430 SLC9A3R2Q15599 337 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 LGI3Q8N145 548 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 PNKDQ8N490 385 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 GLYATL2Q8WU03 294 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 ST6GALNAC6Q969X2 333 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 C5orf30Q96GV9 206 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 ZNF251Q9BRH9 671 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 LPAR2Q9HBW0 351 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 SIRT7Q9NRC8 400 aa10.93□□□□□ -0.66
SRSF1-202ENST00000578430 DBX1A6NMT0 343 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 ODF3BA8MYP8 253 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 BUB1B-PAK6H3BSN5 160 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 RBFOX2O43251 390 aaKnown RBP eCLIP10.92□□□□□ -0.664e-10■■■■□ 23
SRSF1-202ENST00000578430 PROP1O75360 226 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 SERPINE2P07093 398 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 COX7A1P24310 79 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 CEACAM3P40198 252 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 UBE2E1P51965 193 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 TMEM249Q2WGJ8 235 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 RPL39P5Q59GN2 51 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 MINOS1Q5TGZ0 78 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 LIN54Q6MZP7 749 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 OR51H1Q8NH63 302 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 TCTEX1D2Q8WW35 142 aa10.92□□□□□ -0.66
SRSF1-202ENST00000578430 ASB13Q8WXK3 278 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms