RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 GNB3P16520 340 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 CDX1P47902 265 aaPredicted RBP17.99■□□□□ 0.47
VAPA-205ENST00000578314 GLDNQ6ZMI3 551 aaPredicted RBP17.99■□□□□ 0.47
VAPA-205ENST00000578314 KCTD7Q96MP8 289 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 RNF5Q99942 180 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 OR51J1Q9H342 316 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 KIAA1456Q9P272 454 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 RNF150Q9ULK6 438 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 SSR3Q9UNL2 185 aa17.99■□□□□ 0.47
VAPA-205ENST00000578314 RBBP9O75884 186 aa17.98■□□□□ 0.47
VAPA-205ENST00000578314 DIRAS3O95661 229 aa17.98■□□□□ 0.47
VAPA-205ENST00000578314 PSMB8P28062 276 aa17.98■□□□□ 0.47
VAPA-205ENST00000578314 PPIFP30405 207 aaKnown RBP17.98■□□□□ 0.47
VAPA-205ENST00000578314 KIR2DS1Q14954 304 aa17.98■□□□□ 0.47
VAPA-205ENST00000578314 CABLES2Q9BTV7 478 aa17.98■□□□□ 0.47
VAPA-205ENST00000578314 ZNF221Q9UK13 617 aa17.98■□□□□ 0.47
VAPA-205ENST00000578314 WASHC3Q9Y3C0 194 aa17.98■□□□□ 0.47
VAPA-205ENST00000578314 GSTT2P0CG29 244 aa17.97■□□□□ 0.47
VAPA-205ENST00000578314 GSTT2BP0CG30 244 aa17.97■□□□□ 0.47
VAPA-205ENST00000578314 ARL6IP1Q15041 203 aa17.97■□□□□ 0.47
VAPA-205ENST00000578314 SRSF7Q16629 238 aaKnown RBP eCLIP17.97■□□□□ 0.47
VAPA-205ENST00000578314 LCNL1Q6ZST4 164 aa17.97■□□□□ 0.47
VAPA-205ENST00000578314 AURKAIP1Q9NWT8 199 aaPredicted RBP17.97■□□□□ 0.47
VAPA-205ENST00000578314 TRBV6-7A0A0A0MS04 114 aa17.96■□□□□ 0.47
VAPA-205ENST00000578314 SMIM30A4D0T7 59 aa17.96■□□□□ 0.47
VAPA-205ENST00000578314 RRHO14718 337 aa17.96■□□□□ 0.47
VAPA-205ENST00000578314 IGSF11Q5DX21 431 aa17.96■□□□□ 0.47
VAPA-205ENST00000578314 Q6ZS49 121 aa17.96■□□□□ 0.47
VAPA-205ENST00000578314 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.96■□□□□ 0.47
VAPA-205ENST00000578314 RAX2Q96IS3 184 aa17.96■□□□□ 0.47
VAPA-205ENST00000578314 ATG5Q9H1Y0 275 aa17.96■□□□□ 0.47
VAPA-205ENST00000578314 OR51E2Q9H255 320 aa17.96■□□□□ 0.47
VAPA-205ENST00000578314 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.96■□□□□ 0.476e-7■■□□□ 13.2
VAPA-205ENST00000578314 GAB2Q9UQC2 676 aa17.96■□□□□ 0.47
VAPA-205ENST00000578314 A0A075B6Q4 140 aa17.95■□□□□ 0.46
VAPA-205ENST00000578314 H7C2Y5 167 aa17.95■□□□□ 0.46
VAPA-205ENST00000578314 ATP6V0E1O15342 81 aa17.95■□□□□ 0.46
VAPA-205ENST00000578314 GSTP1P09211 210 aaKnown RBP17.95■□□□□ 0.46
VAPA-205ENST00000578314 KCTD21Q4G0X4 260 aa17.95■□□□□ 0.46
VAPA-205ENST00000578314 ZNF660Q6AZW8 331 aaPredicted RBP17.95■□□□□ 0.46
VAPA-205ENST00000578314 ZNF383Q8NA42 475 aa17.95■□□□□ 0.46
VAPA-205ENST00000578314 DRAXINQ8NBI3 349 aaPredicted RBP17.95■□□□□ 0.46
VAPA-205ENST00000578314 OR10J5Q8NHC4 309 aa17.95■□□□□ 0.46
VAPA-205ENST00000578314 MYOZ3Q8TDC0 251 aa17.95■□□□□ 0.46
VAPA-205ENST00000578314 CENPOQ9BU64 300 aa17.95■□□□□ 0.46
VAPA-205ENST00000578314 FBXL15Q9H469 300 aa17.95■□□□□ 0.46
VAPA-205ENST00000578314 ZNF230Q9UIE0 474 aaPredicted RBP17.95■□□□□ 0.46
VAPA-205ENST00000578314 WSB1Q9Y6I7 421 aa17.95■□□□□ 0.46
VAPA-205ENST00000578314 G3V318 75 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 CCL24O00175 119 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 BET1O15155 118 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 IGLV1-40P01703 118 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 TFAP2AP05549 437 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 CDNFQ49AH0 187 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 MINDY2Q8NBR6 621 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 OR8U1Q8NH10 309 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 MAFIPQ8WZ33 124 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 MCRIP2Q9BUT9 160 aaKnown RBP17.94■□□□□ 0.46
VAPA-205ENST00000578314 GPR61Q9BZJ8 451 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 PARP11Q9NR21 331 aa17.94■□□□□ 0.46
VAPA-205ENST00000578314 TRAV41A0A0B4J266 112 aa17.93■□□□□ 0.46
VAPA-205ENST00000578314 SDC2P34741 201 aa17.93■□□□□ 0.46
VAPA-205ENST00000578314 TALDO1P37837 337 aa17.93■□□□□ 0.46
VAPA-205ENST00000578314 CRIP2P52943 208 aaPredicted RBP17.93■□□□□ 0.46
VAPA-205ENST00000578314 LINC00205P59089 165 aa17.93■□□□□ 0.46
VAPA-205ENST00000578314 CX3CL1P78423 397 aa17.93■□□□□ 0.46
VAPA-205ENST00000578314 ARFRP1Q13795 201 aa17.93■□□□□ 0.46
VAPA-205ENST00000578314 KIAA0141Q14154 515 aaPredicted RBP17.93■□□□□ 0.46
VAPA-205ENST00000578314 SFXN4Q6P4A7 337 aa17.93■□□□□ 0.46
VAPA-205ENST00000578314 MRAPQ8TCY5 172 aa17.93■□□□□ 0.46
VAPA-205ENST00000578314 DUX3Q96PT4 197 aa17.93■□□□□ 0.46
VAPA-205ENST00000578314 DAPK2Q9UIK4 370 aa17.93■□□□□ 0.46
VAPA-205ENST00000578314 ELF5Q9UKW6 265 aaPredicted RBP17.93■□□□□ 0.46
VAPA-205ENST00000578314 RRP15Q9Y3B9 282 aaKnown RBP17.93■□□□□ 0.46
VAPA-205ENST00000578314 FCN1O00602 326 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 IGKV1-16P04430 117 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 OR8U9P0C7N5 309 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 DTYMKP23919 212 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 NDPQ00604 133 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 EGFEM1PQ0D2K5 195 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 PSG5Q15238 335 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 C19orf54Q5BKX5 351 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 PDPNQ86YL7 162 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 C4orf3Q8WVX3 66 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 KLK15Q9H2R5 256 aa17.92■□□□□ 0.46
VAPA-205ENST00000578314 M0R1X1 148 aa17.91■□□□□ 0.46
VAPA-205ENST00000578314 SNRPBP14678 240 aaKnown RBP17.91■□□□□ 0.46
VAPA-205ENST00000578314 KRTAP10-11P60412 298 aa17.91■□□□□ 0.46
VAPA-205ENST00000578314 HACD4Q5VWC8 232 aa17.91■□□□□ 0.46
VAPA-205ENST00000578314 TMEM65Q6PI78 240 aa17.91■□□□□ 0.46
VAPA-205ENST00000578314 UBE2E2Q96LR5 201 aa17.91■□□□□ 0.46
VAPA-205ENST00000578314 RNF167Q9H6Y7 350 aa17.91■□□□□ 0.46
VAPA-205ENST00000578314 SDHAF2Q9NX18 166 aa17.91■□□□□ 0.46
VAPA-205ENST00000578314 FBXO7Q9Y3I1 522 aa17.91■□□□□ 0.46
VAPA-205ENST00000578314 IGKV1D-8A0A087WSZ0 117 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 SCGNO76038 276 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 APOA2P02652 100 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 EGR2P11161 476 aaPredicted RBP17.9■□□□□ 0.46
VAPA-205ENST00000578314 CD36P16671 472 aa17.9■□□□□ 0.46
VAPA-205ENST00000578314 RPS16P62249 146 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms