RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SOX2P48431 317 aa8.69□□□□□ -1.02
SMARCE1-214ENST00000578112 AKIRIN2Q53H80 203 aa8.69□□□□□ -1.02
SMARCE1-214ENST00000578112 OR2K2Q8NGT1 345 aa8.69□□□□□ -1.02
SMARCE1-214ENST00000578112 CCDC107Q8WV48 283 aa8.69□□□□□ -1.02
SMARCE1-214ENST00000578112 RHOVQ96L33 236 aa8.69□□□□□ -1.02
SMARCE1-214ENST00000578112 OR4C12Q96R67 309 aa8.69□□□□□ -1.02
SMARCE1-214ENST00000578112 ZNF184Q99676 751 aaPredicted RBP8.69□□□□□ -1.02
SMARCE1-214ENST00000578112 PARP11Q9NR21 331 aa8.69□□□□□ -1.02
SMARCE1-214ENST00000578112 NUBP2Q9Y5Y2 271 aa8.69□□□□□ -1.02
SMARCE1-214ENST00000578112 SMIM31A0A1B0GVY4 71 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 NOL3O60936 208 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 PDCD6O75340 191 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 SPNP16150 400 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 BLVRBP30043 206 aaPredicted RBP8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 ZNF134P52741 427 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 HMGN3Q15651 99 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 ODF3L1Q8IXM7 274 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 SPATA25Q9BR10 227 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 RIMS4Q9H426 269 aaPredicted RBP8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 TAF9BQ9HBM6 251 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 OR2S2Q9NQN1 319 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 DIABLOQ9NR28 239 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 ABRACLQ9P1F3 81 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 STEAP1Q9UHE8 339 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 IGHV3-43A0A0B4J1X8 118 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 TRAV39A0A0B4J263 110 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 IGHV3-43DP0DP04 118 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 ZP3P21754 424 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 SLC22A6Q4U2R8 563 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 DMKNQ6E0U4 476 aaPredicted RBP8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 OR1L1Q8NH94 360 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 GALMQ96C23 342 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 Q96M66 194 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 S100A14Q9HCY8 104 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 SIGLEC8Q9NYZ4 499 aa8.68□□□□□ -1.02
SMARCE1-214ENST00000578112 RYR3Q15413 4870 aa8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 LOC100130705A0A1B0GUX0 176 aa8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 ZNF736B4DX44 427 aaPredicted RBP8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 RRHO14718 337 aa8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 MYL12AP19105 171 aa8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 GLIPR1L1Q6UWM5 242 aa8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 MRPL30Q8TCC3 161 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 DLX4Q92988 240 aaPredicted RBP8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 MRPL20Q9BYC9 149 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 KLK15Q9H2R5 256 aa8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 PEX16Q9Y5Y5 336 aa8.67□□□□□ -1.02
SMARCE1-214ENST00000578112 TRBV6-6A0A0A6YYG2 114 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 H0Y980 276 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 RAB29O14966 203 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 IGLV1-51P01701 117 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 GALP22466 123 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 RCVRNP35243 200 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 AP2S1P53680 142 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 C6orf141Q5SZD1 244 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 SLC24A4Q8NFF2 622 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 SULT4A1Q9BR01 284 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 EDA2RQ9HAV5 297 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 IFNA6P05013 189 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 MYF6P23409 242 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 AWAT2Q6E213 333 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 ZNF880Q6PDB4 577 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 CBR4Q8N4T8 237 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 OR2AK2Q8NG84 335 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 OR10V1Q8NGI7 309 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 OR14A2Q96R54 314 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 TSNAXQ99598 290 aaKnown RBP8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 ANKRD60Q9BZ19 345 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 SLC23A1Q9UHI7 598 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 WASHC3Q9Y3C0 194 aa8.66□□□□□ -1.02
SMARCE1-214ENST00000578112 A0A0G2JLM5 398 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 G3V318 75 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 H3BNX3 289 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 MGMTP16455 207 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 AADACP22760 399 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 ZIK1Q3SY52 487 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 PXDC1Q5TGL8 231 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 ZNF562Q6V9R5 426 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 TPRA1Q86W33 373 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 ZNF555Q8NEP9 628 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 OR4K15Q8NH41 348 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 APH1BQ8WW43 257 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 EDARADDQ8WWZ3 215 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 MUL1Q969V5 352 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 SEC22CQ9BRL7 303 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 RANGRFQ9HD47 186 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 WSB1Q9Y6I7 421 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 HES5Q5TA89 166 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 TTC23Q5W5X9 447 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 PPP1R27Q86WC6 154 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 LAX1Q8IWV1 398 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 OR5AN1Q8NGI8 311 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 PHYHIPQ92561 330 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 GHSRQ92847 366 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 TRIM63Q969Q1 353 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 MARC2Q969Z3 335 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 IFI27L2Q9H2X8 130 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 PLGRKTQ9HBL7 147 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 ZNF581Q9P0T4 197 aa8.65□□□□□ -1.02
SMARCE1-214ENST00000578112 IGHV4OR15-8A0A075B7B6 117 aa8.64□□□□□ -1.03
SMARCE1-214ENST00000578112 A0A087WW49 117 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms