RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 CLDND2Q8NHS1 167 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 TCTEX1D2Q8WW35 142 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 MARVELD3Q96A59 401 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 PERPQ96FX8 193 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 SEC22AQ96IW7 307 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 AKAP6Q13023 2319 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 G3V3Q6 166 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 RPA2P15927 270 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 NKX2-5P52952 324 aaPredicted RBP15.2■□□□□ 0.02
PRKCA-203ENST00000578063 FGL1Q08830 312 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 OR9G1Q8NH87 305 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 ZNF596Q8TC21 504 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 WDR89Q96FK6 387 aaPredicted RBP15.2■□□□□ 0.02
PRKCA-203ENST00000578063 C2orf50Q96LR7 162 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 TMEM133Q9H2Q1 129 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 COMMD9Q9P000 198 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 MALRD1Q5VYJ5 2156 aa15.2■□□□□ 0.02
PRKCA-203ENST00000578063 SAA2-SAA4A0A096LPE2 208 aa15.19■□□□□ 0.02
PRKCA-203ENST00000578063 MPTX1A8MV57 137 aa15.19■□□□□ 0.02
PRKCA-203ENST00000578063 KIAA1324LA8MWY0 1029 aaPredicted RBP15.19■□□□□ 0.02
PRKCA-203ENST00000578063 M0R1W7 72 aa15.19■□□□□ 0.02
PRKCA-203ENST00000578063 M0R1X1 148 aa15.19■□□□□ 0.02
PRKCA-203ENST00000578063 SAA2P0DJI9 122 aaPredicted RBP15.19■□□□□ 0.02
PRKCA-203ENST00000578063 DUTP33316 252 aaKnown RBP15.19■□□□□ 0.02
PRKCA-203ENST00000578063 LMO4P61968 165 aa15.19■□□□□ 0.02
PRKCA-203ENST00000578063 RPL30P62888 115 aaKnown RBP15.19■□□□□ 0.02
PRKCA-203ENST00000578063 RPL39P5Q59GN2 51 aa15.19■□□□□ 0.02
PRKCA-203ENST00000578063 ODF3L1Q8IXM7 274 aa15.19■□□□□ 0.02
PRKCA-203ENST00000578063 OR10C1Q96KK4 312 aa15.19■□□□□ 0.02
PRKCA-203ENST00000578063 ONECUT1Q9UBC0 465 aa15.19■□□□□ 0.02
PRKCA-203ENST00000578063 VWC2LB2RUY7 222 aa15.18■□□□□ 0.02
PRKCA-203ENST00000578063 ENSAO43768 121 aaKnown RBP15.18■□□□□ 0.02
PRKCA-203ENST00000578063 PROP1O75360 226 aa15.18■□□□□ 0.02
PRKCA-203ENST00000578063 VDAC1P21796 283 aa15.18■□□□□ 0.02
PRKCA-203ENST00000578063 IAH1Q2TAA2 248 aaPredicted RBP15.18■□□□□ 0.02
PRKCA-203ENST00000578063 KIR3DL3Q8N743 410 aa15.18■□□□□ 0.02
PRKCA-203ENST00000578063 CD300LFQ8TDQ1 290 aa15.18■□□□□ 0.02
PRKCA-203ENST00000578063 PPP1R1CQ8WVI7 109 aa15.18■□□□□ 0.02
PRKCA-203ENST00000578063 TNFRSF14Q92956 283 aa15.18■□□□□ 0.02
PRKCA-203ENST00000578063 S1PR3Q99500 378 aa15.18■□□□□ 0.02
PRKCA-203ENST00000578063 TACC2O95359 2948 aa15.18■□□□□ 0.02
PRKCA-203ENST00000578063 J3QR06 171 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 ZNF585BQ52M93 769 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 Q5BKY6 102 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 SPAG16Q8N0X2 631 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 ABHD12Q8N2K0 398 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 ADTRPQ96IZ2 230 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 SPIN2AQ99865 258 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 SPIN2BQ9BPZ2 258 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 ZNF251Q9BRH9 671 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 LINC00473A8K010 186 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 KIR2DS2P43631 304 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 CRYBG3Q68DQ2 2970 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 FAM71F2Q6NXP2 309 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 OR10X1Q8NGY0 326 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 BEX4Q9NWD9 120 aaPredicted RBP15.17■□□□□ 0.02
PRKCA-203ENST00000578063 PRELID3BQ9Y3B1 194 aa15.17■□□□□ 0.02
PRKCA-203ENST00000578063 FOXH1O75593 365 aa15.16■□□□□ 0.02
PRKCA-203ENST00000578063 ZFP36P26651 326 aaKnown RBP15.16■□□□□ 0.02
PRKCA-203ENST00000578063 THBS3P49746 956 aa15.16■□□□□ 0.02
PRKCA-203ENST00000578063 ZNF833PQ6ZTB9 187 aa15.16■□□□□ 0.02
PRKCA-203ENST00000578063 OR11H4Q8NGC9 324 aa15.16■□□□□ 0.02
PRKCA-203ENST00000578063 CLEC7AQ9BXN2 247 aa15.16■□□□□ 0.02
PRKCA-203ENST00000578063 IGHV2-26A0A0B4J1V2 119 aa15.15■□□□□ 0.02
PRKCA-203ENST00000578063 TOR1AO14656 332 aa15.15■□□□□ 0.02
PRKCA-203ENST00000578063 RBFOX2O43251 390 aaKnown RBP eCLIP15.15■□□□□ 0.022e-7■■■■□ 20
PRKCA-203ENST00000578063 ATG12O94817 140 aa15.15■□□□□ 0.02
PRKCA-203ENST00000578063 IL3RAP26951 378 aa15.15■□□□□ 0.02
PRKCA-203ENST00000578063 LPAR6P43657 344 aa15.15■□□□□ 0.02
PRKCA-203ENST00000578063 KRTAP10-9P60411 292 aa15.15■□□□□ 0.02
PRKCA-203ENST00000578063 NMSQ5H8A3 153 aa15.15■□□□□ 0.02
PRKCA-203ENST00000578063 C1orf122Q6ZSJ8 110 aa15.15■□□□□ 0.02
PRKCA-203ENST00000578063 ZBTB8BQ8NAP8 495 aaPredicted RBP15.15■□□□□ 0.02
PRKCA-203ENST00000578063 LSM10Q969L4 123 aaKnown RBP15.15■□□□□ 0.02
PRKCA-203ENST00000578063 GSKIPQ9P0R6 139 aa15.15■□□□□ 0.02
PRKCA-203ENST00000578063 CENPEQ02224 2701 aa15.15■□□□□ 0.02
PRKCA-203ENST00000578063 YLPM1P49750 1951 aaKnown RBP15.15■□□□□ 0.02
PRKCA-203ENST00000578063 TRAV14DV4A0A0A6YYC5 116 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 RAMP3O60896 148 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 IGKV1-39P01597 117 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 IGKV1D-39P04432 117 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 PSMB6P28072 239 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 ZNF137PP52743 207 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 AKR1C2P52895 323 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 PRRX1P54821 245 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 ARF6P62330 175 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 IL15RAQ13261 267 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 LRRC37A5PQ49AS3 106 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 OR2B11Q5JQS5 317 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 NCR3LG1Q68D85 454 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 THOC7Q6I9Y2 204 aaKnown RBP15.14■□□□□ 0.01
PRKCA-203ENST00000578063 Q8N7P7 452 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 DRAXINQ8NBI3 349 aaPredicted RBP15.14■□□□□ 0.01
PRKCA-203ENST00000578063 BEND2Q8NDZ0 799 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 RNASE11Q8TAA1 199 aaKnown RBP15.14■□□□□ 0.01
PRKCA-203ENST00000578063 TMEM186Q96B77 213 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 ZNRD1Q9P1U0 126 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 KPTNQ9Y664 436 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 DOCK11Q5JSL3 2073 aa15.14■□□□□ 0.01
PRKCA-203ENST00000578063 IGHV4-30-2A0A087WSY4 118 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms