RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 VWC2LB2RUY7 222 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 M0R1X1 148 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 ZNF16P17020 682 aaPredicted RBP12.4□□□□□ -0.42
IFT20-204ENST00000577498 VDAC1P21796 283 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 DUTP33316 252 aaKnown RBP12.4□□□□□ -0.42
IFT20-204ENST00000577498 KIR2DS2P43631 304 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 GNG10P50151 68 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 LMO4P61968 165 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 RPL30P62888 115 aaKnown RBP12.4□□□□□ -0.42
IFT20-204ENST00000577498 IAH1Q2TAA2 248 aaPredicted RBP12.4□□□□□ -0.42
IFT20-204ENST00000577498 UTF1Q5T230 341 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 FAM71F2Q6NXP2 309 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 C1orf122Q6ZSJ8 110 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 ODF3L1Q8IXM7 274 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 LYG1Q8N1E2 194 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 KIR3DL3Q8N743 410 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 CLDND2Q8NHS1 167 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 WDR89Q96FK6 387 aaPredicted RBP12.4□□□□□ -0.42
IFT20-204ENST00000577498 OR10C1Q96KK4 312 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 S1PR3Q99500 378 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 SPIN2AQ99865 258 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 SPIN2BQ9BPZ2 258 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 DOCK11Q5JSL3 2073 aa12.4□□□□□ -0.42
IFT20-204ENST00000577498 SAA2-SAA4A0A096LPE2 208 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 A0A1W2PPE3 182 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 HMSDA8MTL9 139 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 MPTX1A8MV57 137 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 J3QR06 171 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 RBFOX2O43251 390 aaKnown RBP eCLIP12.39□□□□□ -0.43
IFT20-204ENST00000577498 ENSAO43768 121 aaKnown RBP12.39□□□□□ -0.43
IFT20-204ENST00000577498 PROP1O75360 226 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 ATG12O94817 140 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 IGHV3-7P01780 117 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 SAA2P0DJI9 122 aaPredicted RBP12.39□□□□□ -0.43
IFT20-204ENST00000577498 SLC25A6P12236 298 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 COL8A1P27658 744 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 THBS3P49746 956 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 NKX2-5P52952 324 aaPredicted RBP12.39□□□□□ -0.43
IFT20-204ENST00000577498 ERVFRD-1P60508 538 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 IL15RAQ13261 267 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 ZNF585BQ52M93 769 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 Q5BKY6 102 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 NMSQ5H8A3 153 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 BTNL3Q6UXE8 466 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 OR11H4Q8NGC9 324 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 PPP1R1CQ8WVI7 109 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 LSM10Q969L4 123 aaKnown RBP12.39□□□□□ -0.43
IFT20-204ENST00000577498 ZNF251Q9BRH9 671 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 ZFP57Q9NU63 452 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 PRELID3BQ9Y3B1 194 aa12.39□□□□□ -0.43
IFT20-204ENST00000577498 YLPM1P49750 1951 aaKnown RBP12.38□□□□□ -0.43
IFT20-204ENST00000577498 LRBAP50851 2863 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 COL12A1Q99715 3063 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 FOXH1O75593 365 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 SLC25A4P12235 298 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 PSMB6P28072 239 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 LPAR6P43657 344 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 ZNF137PP52743 207 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 RPL39P5Q59GN2 51 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 TMEM65Q6PI78 240 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 ZNF833PQ6ZTB9 187 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 SPAG16Q8N0X2 631 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 ABHD12Q8N2K0 398 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 ZBTB8BQ8NAP8 495 aaPredicted RBP12.38□□□□□ -0.43
IFT20-204ENST00000577498 PERPQ96FX8 193 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 CLEC7AQ9BXN2 247 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 BEX4Q9NWD9 120 aaPredicted RBP12.38□□□□□ -0.43
IFT20-204ENST00000577498 ONECUT1Q9UBC0 465 aa12.38□□□□□ -0.43
IFT20-204ENST00000577498 POLR3KQ9Y2Y1 108 aaPredicted RBP12.38□□□□□ -0.43
IFT20-204ENST00000577498 AKAP6Q13023 2319 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 TRAV14DV4A0A0A6YYC5 116 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 LINC00473A8K010 186 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 MPC2O95563 127 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 IGKV1-39P01597 117 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 IGKV1D-39P04432 117 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 PET100P0DJ07 73 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 IL3RAP26951 378 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 PRRX1P54821 245 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 NCR3LG1Q68D85 454 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 FAM219AQ8IW50 185 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 BEND2Q8NDZ0 799 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 OR10X1Q8NGY0 326 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 THAP6Q8TBB0 222 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 DDB2Q92466 427 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 MARVELD3Q96A59 401 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 TMEM186Q96B77 213 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 GSKIPQ9P0R6 139 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 KPTNQ9Y664 436 aa12.37□□□□□ -0.43
IFT20-204ENST00000577498 IGHV2-26A0A0B4J1V2 119 aa12.36□□□□□ -0.43
IFT20-204ENST00000577498 A0A1B0GU03 582 aa12.36□□□□□ -0.43
IFT20-204ENST00000577498 TOR1AO14656 332 aa12.36□□□□□ -0.43
IFT20-204ENST00000577498 PRTN3P24158 256 aa12.36□□□□□ -0.43
IFT20-204ENST00000577498 ZFP36P26651 326 aaKnown RBP12.36□□□□□ -0.43
IFT20-204ENST00000577498 BRWD1-AS2P59051 145 aa12.36□□□□□ -0.43
IFT20-204ENST00000577498 TAGLNQ01995 201 aaKnown RBP12.36□□□□□ -0.43
IFT20-204ENST00000577498 PAX2Q02962 417 aa12.36□□□□□ -0.43
IFT20-204ENST00000577498 THOC7Q6I9Y2 204 aaKnown RBP12.36□□□□□ -0.43
IFT20-204ENST00000577498 C11orf87Q6NUJ2 197 aa12.36□□□□□ -0.43
IFT20-204ENST00000577498 LRRC75A-AS1Q8N1F1 130 aa12.36□□□□□ -0.43
IFT20-204ENST00000577498 C9orf62Q8N4C0 152 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms