RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 PACRGLQ8N7B6 248 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 OR1M1Q8NGA1 313 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 GPR32P1Q8NGA4 272 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 OR8K1Q8NGG5 319 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 OR51H1Q8NH63 302 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 LMX1AQ8TE12 382 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 OPTNQ96CV9 577 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 DGCR14Q96DF8 476 aaKnown RBP1.3□□□□□ -2.2
COPS3-213ENST00000577210 SLC25A44Q96H78 314 aaPredicted RBP1.3□□□□□ -2.2
COPS3-213ENST00000577210 DIRAS2Q96HU8 199 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 PYURFQ96I23 114 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 CCDC94Q9BW85 323 aaPredicted RBP1.3□□□□□ -2.2
COPS3-213ENST00000577210 ABCG5Q9H222 651 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 TRIM45Q9H8W5 580 aaPredicted RBP1.3□□□□□ -2.2
COPS3-213ENST00000577210 CXorf21Q9HAI6 301 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 UBQLN4Q9NRR5 601 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 ASF1BQ9NVP2 202 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 ZNF443Q9Y2A4 671 aaPredicted RBP1.3□□□□□ -2.2
COPS3-213ENST00000577210 CHD2O14647 1828 aaKnown RBP1.3□□□□□ -2.2
COPS3-213ENST00000577210 ZBED9Q6R2W3 1325 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 KIF15Q9NS87 1388 aa1.3□□□□□ -2.2
COPS3-213ENST00000577210 THSD7AQ9UPZ6 1657 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 COL27A1Q8IZC6 1860 aaPredicted RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 LOXHD1Q8IVV2 1947 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 BAZ2AQ9UIF9 1905 aaKnown RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 NUP214P35658 2090 aaPredicted RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 TMED7-TICAM2A0A0A6YYA0 188 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 IGSF23A1L1A6 192 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 VPS37CA5D8V6 355 aaPredicted RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 TMEM210A6NLX4 147 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 GGTLC3B5MD39 225 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 C15orf65H3BRN8 121 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 GSTZ1O43708 216 aaPredicted RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 DCTN3O75935 186 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 TCRBP04435 133 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 IFNA6P05013 189 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 HIST1H1EP10412 219 aaKnown RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 UCHL3P15374 230 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 RAP1GDS1P52306 607 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 SPCS3P61009 180 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 LSM6P62312 80 aaKnown RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 RPS24P62847 133 aaKnown RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 REEP5Q00765 189 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 IFITM2Q01629 132 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 EBPQ15125 230 aaKnown RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 OR8G1Q15617 311 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 ZNF141Q15928 474 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 KRTAP25-1Q3LHN0 102 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 PYDC2Q56P42 97 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 HIST2H3PS2Q5TEC6 136 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 Q6ZQT7 251 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 CCDC121Q6ZUS5 278 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 LYZL2Q7Z4W2 148 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 LRRC34Q8IZ02 419 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 ZNF664Q8N3J9 261 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 RPRMLQ8N4K4 120 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 BPIFB6Q8NFQ5 453 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 OR2T27Q8NH04 317 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 OR4K13Q8NH42 304 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 OR5P3Q8WZ94 311 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 C12orf43Q96C57 262 aaKnown RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 IGF2BP2-AS1Q96M15 143 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 NMNAT3Q96T66 252 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 TBX5Q99593 518 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 PECRQ9BY49 303 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 LRRC19Q9H756 370 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 FKBP14Q9NWM8 211 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 ANAPC10Q9UM13 185 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 SNX12Q9UMY4 172 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 FIS1Q9Y3D6 152 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 LSM5Q9Y4Y9 91 aaKnown RBP1.29□□□□□ -2.2
COPS3-213ENST00000577210 NID2Q14112 1375 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 GRIN2BQ13224 1484 aa1.29□□□□□ -2.2
COPS3-213ENST00000577210 ANKRD12Q6UB98 2062 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 IGHV3OR15-7A0A075B7D8 119 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 H3BSA7 217 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 TRAPPC3O43617 180 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 CNIH1O95406 144 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 SOD1P00441 154 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 IGHV3-53P01767 116 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 ESDP10768 282 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 ZNF22P17026 224 aaPredicted RBP1.28□□□□□ -2.2
COPS3-213ENST00000577210 CA7P43166 264 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 OMPP47874 163 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 FOXA1P55317 472 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 RANP62826 216 aaKnown RBP1.28□□□□□ -2.2
COPS3-213ENST00000577210 EMX1Q04741 257 aaPredicted RBP1.28□□□□□ -2.2
COPS3-213ENST00000577210 BAMBIQ13145 260 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 DHRS2Q13268 280 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 OR2F1Q13607 317 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 IHHQ14623 411 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 DEFB134Q4QY38 66 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 MRPL51Q4U2R6 128 aaKnown RBP1.28□□□□□ -2.2
COPS3-213ENST00000577210 FAM78BQ5VT40 261 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 NOXRED1Q6NXP6 359 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 SFXN4Q6P4A7 337 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 TCF24Q7RTU0 167 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 S100A7AQ86SG5 101 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 C3orf22Q8N5N4 141 aa1.28□□□□□ -2.2
COPS3-213ENST00000577210 OR2T4Q8NH00 348 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms