RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 CNIH1O95406 144 aa8.86□□□□□ -0.99
CTDNEP1-212ENST00000576613 FXYD3Q14802 87 aa8.86□□□□□ -0.99
CTDNEP1-212ENST00000576613 IL34Q6ZMJ4 242 aa8.86□□□□□ -0.99
CTDNEP1-212ENST00000576613 OR2K2Q8NGT1 345 aa8.86□□□□□ -0.99
CTDNEP1-212ENST00000576613 EDARADDQ8WWZ3 215 aa8.86□□□□□ -0.99
CTDNEP1-212ENST00000576613 ABHD14BQ96IU4 210 aa8.86□□□□□ -0.99
CTDNEP1-212ENST00000576613 FAM110AQ9BQ89 295 aa8.86□□□□□ -0.99
CTDNEP1-212ENST00000576613 UQCC2Q9BRT2 126 aa8.86□□□□□ -0.99
CTDNEP1-212ENST00000576613 CHMP1AQ9HD42 196 aaPredicted RBP8.86□□□□□ -0.99
CTDNEP1-212ENST00000576613 PEF1Q9UBV8 284 aaKnown RBP8.86□□□□□ -0.99
CTDNEP1-212ENST00000576613 TRBV5-7A0A0A0MS05 114 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 A0A1W2PPK0 400 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 ITGB1BP1O14713 200 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 OR2A4O95047 310 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 LALBAP00709 142 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 APOA2P02652 100 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 CSN3P07498 182 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 LGALS7P47929 136 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 CD81P60033 236 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 RPS16P62249 146 aaKnown RBP8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 RPS11P62280 158 aaKnown RBP eCLIP8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 MED21Q13503 144 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 RPEL1Q2QD12 228 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 RNLSQ5VYX0 342 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 MOB1BQ7L9L4 216 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 LAX1Q8IWV1 398 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 SVOPQ8N4V2 548 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 OR5T1Q8NG75 326 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 SETD6Q8TBK2 473 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 APH1BQ8WW43 257 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 THRSPQ92748 146 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 TMEM68Q96MH6 324 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 SLC29A1Q99808 456 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 SULT4A1Q9BR01 284 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 C9orf16Q9BUW7 83 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 PLEKHA3Q9HB20 300 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 SLC2A8Q9NY64 477 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 PEMTQ9UBM1 199 aa8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 EXOSC1Q9Y3B2 195 aaKnown RBP8.85□□□□□ -0.99
CTDNEP1-212ENST00000576613 A0A0B4J203 849 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 AIREO43918 545 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 BRI3O95415 125 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 IGKV1-16P04430 117 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 UBBP0CG47 229 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 ZBTB25P24278 435 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 SMN1Q16637 294 aaKnown RBP8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 ZNF343Q6P1L6 599 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 ZFP1Q6P2D0 407 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 LINC00322Q6ZN03 302 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 C6orf201Q7Z4U5 140 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 PDPNQ86YL7 162 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 DRAXINQ8NBI3 349 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 USMG5Q96IX5 58 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 CYYR1Q96J86 154 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 PGLYRP3Q96LB9 341 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 DERL3Q96Q80 235 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 NEURL2Q9BR09 285 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 AGMATQ9BSE5 352 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 FAAP24Q9BTP7 215 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 TINAGL1Q9GZM7 467 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 DIMT1Q9UNQ2 313 aaKnown RBP8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 ALMS1Q8TCU4 4167 aa8.84□□□□□ -0.99
CTDNEP1-212ENST00000576613 IZUMO1RA6ND01 250 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 H3BNX3 289 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 NAPSAO96009 420 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 MAPK3P27361 379 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-212ENST00000576613 TAS2R43P59537 309 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 ZFP41Q8N8Y5 198 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 BVESQ8NE79 360 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 LINC00476Q8WZB0 136 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 SNAPC3Q92966 411 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 TMEM59Q9BXS4 323 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 KRTAP17-1Q9BYP8 105 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 PARP12Q9H0J9 701 aaKnown RBP8.83□□□□□ -1
CTDNEP1-212ENST00000576613 RIMS4Q9H426 269 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-212ENST00000576613 COA4Q9NYJ1 87 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 ZNF221Q9UK13 617 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 MGAT4AQ9UM21 535 aa8.83□□□□□ -1
CTDNEP1-212ENST00000576613 DYNC1I1O14576 645 aa8.82□□□□□ -1
CTDNEP1-212ENST00000576613 WBP4O75554 376 aaKnown RBP8.82□□□□□ -1
CTDNEP1-212ENST00000576613 TRBV12-3P01733 135 aa8.82□□□□□ -1
CTDNEP1-212ENST00000576613 CEACAM6P40199 344 aa8.82□□□□□ -1
CTDNEP1-212ENST00000576613 RPS27AP62979 156 aaKnown RBP8.82□□□□□ -1
CTDNEP1-212ENST00000576613 ZNF880Q6PDB4 577 aa8.82□□□□□ -1
CTDNEP1-212ENST00000576613 ZNF383Q8NA42 475 aa8.82□□□□□ -1
CTDNEP1-212ENST00000576613 ZNF555Q8NEP9 628 aa8.82□□□□□ -1
CTDNEP1-212ENST00000576613 TMEM80Q96HE8 168 aa8.82□□□□□ -1
CTDNEP1-212ENST00000576613 C11orf54Q9H0W9 315 aaPredicted RBP8.82□□□□□ -1
CTDNEP1-212ENST00000576613 PLEKHJ1Q9NW61 149 aa8.82□□□□□ -1
CTDNEP1-212ENST00000576613 CLEC2DQ9UHP7 191 aa8.82□□□□□ -1
CTDNEP1-212ENST00000576613 ADAM30Q9UKF2 790 aa8.82□□□□□ -1
CTDNEP1-212ENST00000576613 PNMA8CA0A1B0GUJ8 204 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 LY6G6CO95867 125 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 SNRPBP14678 240 aaKnown RBP8.81□□□□□ -1
CTDNEP1-212ENST00000576613 MECP2P51608 486 aaKnown RBP8.81□□□□□ -1
CTDNEP1-212ENST00000576613 HLA-DRB3P79483 266 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 SSBP2P81877 361 aaPredicted RBP8.81□□□□□ -1
CTDNEP1-212ENST00000576613 DEFA5Q01523 94 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 CBX3Q13185 183 aa8.81□□□□□ -1
CTDNEP1-212ENST00000576613 DYRK1AQ13627 763 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms