RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 FXYD4P59646 89 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 HILS1P60008 231 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 TSPAN5P62079 268 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 SRSF2Q01130 221 aaKnown RBP6.89□□□□□ -1.31
NUP88-211ENST00000575976 SLC9A3R2Q15599 337 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 AANATQ16613 207 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 LRRC75BQ2VPJ9 315 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 CCDC144NLQ6NUI1 221 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 FAAP20Q6NZ36 180 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 MOB3BQ86TA1 216 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 TGIF2LXQ8IUE1 241 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 OR8H3Q8N146 312 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 GDPD1Q8N9F7 314 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 OR6F1Q8NGZ6 308 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 CFHR4Q92496 578 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 RBMXL1Q96E39 390 aaKnown RBP6.89□□□□□ -1.31
NUP88-211ENST00000575976 S1PR3Q99500 378 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 NABP2Q9BQ15 211 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 OR2D2Q9H210 308 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 GHITMQ9H3K2 345 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 ABCB10Q9NRK6 738 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 SDHAF2Q9NX18 166 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 TAS2R8Q9NYW2 309 aa6.89□□□□□ -1.31
NUP88-211ENST00000575976 ZNF107Q9UII5 783 aaPredicted RBP6.89□□□□□ -1.31
NUP88-211ENST00000575976 A0A0A6YYJ9 748 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 DNAJC9-AS1A6NH13 148 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 OR5H14A6NHG9 310 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 FAM90A9PA6NNJ1 464 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 M0R1X1 148 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 TXNL1O43396 289 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 IGLV2-14P01704 120 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 IFNA6P05013 189 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 AKAIN1P0CW23 69 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 CT45A6P0DMU7 189 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 CT45A5P0DMU8 189 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 CT45A7P0DMV0 189 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 TBPP20226 339 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 BRS3P32247 399 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 DYNLT3P51808 116 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 ARHGDIBP52566 201 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 HERV-K104P61576 105 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 KLF9Q13886 244 aaPredicted RBP6.88□□□□□ -1.31
NUP88-211ENST00000575976 LY6EQ16553 131 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 FBLN7Q53RD9 439 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 FAM71F2Q6NXP2 309 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 TOMM5Q8N4H5 51 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 DRAM1Q8N682 238 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 ZNF645Q8N7E2 425 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 DRAXINQ8NBI3 349 aaPredicted RBP6.88□□□□□ -1.31
NUP88-211ENST00000575976 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.88□□□□□ -1.31
NUP88-211ENST00000575976 OR4C16Q8NGL9 310 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 OR56B4Q8NH76 319 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 FAM216AQ8WUB2 273 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 SECTM1Q8WVN6 248 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 SSMEM1Q8WWF3 244 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 CAPSLQ8WWF8 208 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 S100ZQ8WXG8 99 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 MOB3AQ96BX8 217 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 JMJD8Q96S16 334 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 MRPL20Q9BYC9 149 aaKnown RBP6.88□□□□□ -1.31
NUP88-211ENST00000575976 SLC5A7Q9GZV3 580 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 FXYD6Q9H0Q3 95 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 DPAGT1Q9H3H5 408 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 CCL28Q9NRJ3 127 aa6.88□□□□□ -1.31
NUP88-211ENST00000575976 A6NDX4 124 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 BTBD17A6NE02 478 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 DISC1C4P0D8 188 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 AMY2AP04746 511 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 SNRNP70P08621 437 aaKnown RBP6.87□□□□□ -1.31
NUP88-211ENST00000575976 IL7P13232 177 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 PPP5CP53041 499 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 UBA52P62987 128 aaKnown RBP6.87□□□□□ -1.31
NUP88-211ENST00000575976 LSAMPQ13449 338 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 HABP2Q14520 560 aaPredicted RBP6.87□□□□□ -1.31
NUP88-211ENST00000575976 ZNF846Q147U1 533 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 MEF2DQ14814 521 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 SCGB2B2Q4G0G5 96 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 AADACL3Q5VUY0 350 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 TRIQKQ629K1 86 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 ZNF57Q68EA5 555 aaPredicted RBP6.87□□□□□ -1.31
NUP88-211ENST00000575976 CCBE1Q6UXH8 406 aaPredicted RBP6.87□□□□□ -1.31
NUP88-211ENST00000575976 GLDNQ6ZMI3 551 aaPredicted RBP6.87□□□□□ -1.31
NUP88-211ENST00000575976 LHFPL1Q86WI0 220 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 TMEM17Q86X19 198 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 ARRDC1Q8N5I2 433 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 TMEM86BQ8N661 226 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 ZNF383Q8NA42 475 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 OR5R1Q8NH85 324 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 CHIAQ9BZP6 476 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 HRASLSQ9HDD0 168 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 TCF19Q9Y242 345 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 POMT1Q9Y6A1 747 aa6.87□□□□□ -1.31
NUP88-211ENST00000575976 LINC00854A0A1B0GVQ3 168 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 H0YJW9 148 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 CLDN34H7C241 214 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 TNFSF12O43508 249 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 GPR137BO60478 399 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 SLC22A5O76082 557 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 IGKV1D-33P01593 117 aa6.86□□□□□ -1.31
NUP88-211ENST00000575976 IGKV1-33P01594 117 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms