RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 CPEP16870 476 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 TATDN3Q17R31 274 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 C6orf141Q5SZD1 244 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 BVESQ8NE79 360 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 OR5AN1Q8NGI8 311 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 SLC2A8Q9NY64 477 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 SIGLEC8Q9NYZ4 499 aa13.25□□□□□ -0.29
CCDC40-211ENST00000574099 A0A1W2PPK0 400 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 H3BNX3 289 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 GPX5O75715 221 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 IGKV1-16P04430 117 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 GLAP06280 429 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 LINC00205P59089 165 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 RPS16P62249 146 aaKnown RBP13.24□□□□□ -0.29
CCDC40-211ENST00000574099 CD300EQ496F6 205 aaPredicted RBP13.24□□□□□ -0.29
CCDC40-211ENST00000574099 CCDC58Q4VC31 144 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 SETD6Q8TBK2 473 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 GHSRQ92847 366 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 SMIM19Q96E16 107 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 OR14A2Q96R54 314 aa13.24□□□□□ -0.29
CCDC40-211ENST00000574099 TSNAXQ99598 290 aaKnown RBP13.24□□□□□ -0.29
CCDC40-211ENST00000574099 TRBV5-5A0A0J9YX44 114 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 OR11H12B2RN74 326 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 OR2A4O95047 310 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 APELAP0DMC3 54 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 ETV1P50549 477 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 SSBP2P81877 361 aaPredicted RBP13.23□□□□□ -0.29
CCDC40-211ENST00000574099 ZNF343Q6P1L6 599 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 RPP25LQ8N5L8 163 aaKnown RBP13.23□□□□□ -0.29
CCDC40-211ENST00000574099 Q96MT0 163 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 RNF5Q99942 180 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 SULT4A1Q9BR01 284 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 COA4Q9NYJ1 87 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 PEMTQ9UBM1 199 aa13.23□□□□□ -0.29
CCDC40-211ENST00000574099 SPDEFO95238 335 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 LALBAP00709 142 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 AADACP22760 399 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 MECP2P51608 486 aaKnown RBP13.22□□□□□ -0.29
CCDC40-211ENST00000574099 PJVKQ0ZLH3 352 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 GUCA2BQ16661 112 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 Q499Y3 187 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 ZFP41Q8N8Y5 198 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 OR2K2Q8NGT1 345 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 DYNLRB2Q8TF09 96 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 FAAP24Q9BTP7 215 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 TINAGL1Q9GZM7 467 aaPredicted RBP13.22□□□□□ -0.29
CCDC40-211ENST00000574099 CHMP1AQ9HD42 196 aaPredicted RBP13.22□□□□□ -0.29
CCDC40-211ENST00000574099 RPL36Q9Y3U8 105 aaKnown RBP13.22□□□□□ -0.29
CCDC40-211ENST00000574099 LRRC42Q9Y546 428 aa13.22□□□□□ -0.29
CCDC40-211ENST00000574099 ZNF785A8K8V0 405 aa13.21□□□□□ -0.29
CCDC40-211ENST00000574099 OGG1O15527 345 aa13.21□□□□□ -0.29
CCDC40-211ENST00000574099 RBMXL2O75526 392 aaKnown RBP13.21□□□□□ -0.29
CCDC40-211ENST00000574099 LAX1Q8IWV1 398 aa13.21□□□□□ -0.29
CCDC40-211ENST00000574099 SVOPQ8N4V2 548 aa13.21□□□□□ -0.29
CCDC40-211ENST00000574099 RHOXF1Q8NHV9 184 aa13.21□□□□□ -0.29
CCDC40-211ENST00000574099 FAM53CQ9NYF3 392 aa13.21□□□□□ -0.29
CCDC40-211ENST00000574099 OR1A1Q9P1Q5 309 aa13.21□□□□□ -0.29
CCDC40-211ENST00000574099 SELENOKQ9Y6D0 94 aa13.21□□□□□ -0.29
CCDC40-211ENST00000574099 A0A0B4J203 849 aa13.2□□□□□ -0.3
CCDC40-211ENST00000574099 EDN2P20800 178 aa13.2□□□□□ -0.3
CCDC40-211ENST00000574099 LGALS7P47929 136 aa13.2□□□□□ -0.3
CCDC40-211ENST00000574099 RPS11P62280 158 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC40-211ENST00000574099 TMPRSS11AQ6ZMR5 421 aa13.2□□□□□ -0.3
CCDC40-211ENST00000574099 C6orf201Q7Z4U5 140 aa13.2□□□□□ -0.3
CCDC40-211ENST00000574099 ZNF383Q8NA42 475 aa13.2□□□□□ -0.3
CCDC40-211ENST00000574099 APH1BQ8WW43 257 aa13.2□□□□□ -0.3
CCDC40-211ENST00000574099 PYDC1Q8WXC3 89 aa13.2□□□□□ -0.3
CCDC40-211ENST00000574099 NEDD4LQ96PU5 975 aa13.2□□□□□ -0.3
CCDC40-211ENST00000574099 AGMATQ9BSE5 352 aa13.2□□□□□ -0.3
CCDC40-211ENST00000574099 MRPS18AQ9NVS2 196 aaKnown RBP13.2□□□□□ -0.3
CCDC40-211ENST00000574099 PROP1O75360 226 aa13.19□□□□□ -0.3
CCDC40-211ENST00000574099 APOA2P02652 100 aa13.19□□□□□ -0.3
CCDC40-211ENST00000574099 CAPGP40121 348 aa13.19□□□□□ -0.3
CCDC40-211ENST00000574099 SMN1Q16637 294 aaKnown RBP13.19□□□□□ -0.3
CCDC40-211ENST00000574099 YIF1BQ5BJH7 314 aa13.19□□□□□ -0.3
CCDC40-211ENST00000574099 OR10K2Q6IF99 312 aa13.19□□□□□ -0.3
CCDC40-211ENST00000574099 PDPNQ86YL7 162 aa13.19□□□□□ -0.3
CCDC40-211ENST00000574099 CBR4Q8N4T8 237 aa13.19□□□□□ -0.3
CCDC40-211ENST00000574099 SNAPC3Q92966 411 aa13.19□□□□□ -0.3
CCDC40-211ENST00000574099 PHB2Q99623 299 aa13.19□□□□□ -0.3
CCDC40-211ENST00000574099 C11orf54Q9H0W9 315 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-211ENST00000574099 FGF20Q9NP95 211 aaPredicted RBP13.19□□□□□ -0.3
CCDC40-211ENST00000574099 KMT2AQ03164 3969 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 TRBV5-7A0A0A0MS05 114 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 PNMA8CA0A1B0GUJ8 204 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 NUPR2A6NF83 97 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 BMPR1BO00238 502 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 DEDDO75618 318 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 CEACAM6P40199 344 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 EWSR1Q01844 656 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC40-211ENST00000574099 WDR89Q96FK6 387 aaPredicted RBP13.18□□□□□ -0.3
CCDC40-211ENST00000574099 USMG5Q96IX5 58 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 PGLYRP3Q96LB9 341 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 OVOL2Q9BRP0 275 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 BABAM2Q9NXR7 383 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 PCLOQ9Y6V0 5065 aa13.18□□□□□ -0.3
CCDC40-211ENST00000574099 DYNC1I1O14576 645 aa13.17□□□□□ -0.3
CCDC40-211ENST00000574099 AIREO43918 545 aa13.17□□□□□ -0.3
CCDC40-211ENST00000574099 IGLV2-23P01705 113 aa13.17□□□□□ -0.3
CCDC40-211ENST00000574099 EXOSC2Q13868 293 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms