RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 RGS10O43665 173 aa14.01□□□□□ -0.17
CHD3-214ENST00000572579 IGKV1-16P04430 117 aa14.01□□□□□ -0.17
CHD3-214ENST00000572579 CD3GP09693 182 aa14.01□□□□□ -0.17
CHD3-214ENST00000572579 VEGFCP49767 419 aa14.01□□□□□ -0.17
CHD3-214ENST00000572579 HLA-DRB3P79483 266 aa14.01□□□□□ -0.17
CHD3-214ENST00000572579 MLLT11Q13015 90 aaPredicted RBP14.01□□□□□ -0.17
CHD3-214ENST00000572579 RAB11BQ15907 218 aa14.01□□□□□ -0.17
CHD3-214ENST00000572579 ZNF660Q6AZW8 331 aaPredicted RBP14.01□□□□□ -0.17
CHD3-214ENST00000572579 TMEM65Q6PI78 240 aa14.01□□□□□ -0.17
CHD3-214ENST00000572579 DCUN1D4Q92564 292 aa14.01□□□□□ -0.17
CHD3-214ENST00000572579 RIMS4Q9H426 269 aaPredicted RBP14.01□□□□□ -0.17
CHD3-214ENST00000572579 PLGRKTQ9HBL7 147 aa14.01□□□□□ -0.17
CHD3-214ENST00000572579 TPRKBQ9Y3C4 175 aa14.01□□□□□ -0.17
CHD3-214ENST00000572579 CALRP27797 417 aaKnown RBP14□□□□□ -0.17
CHD3-214ENST00000572579 SSBP2P81877 361 aaPredicted RBP14□□□□□ -0.17
CHD3-214ENST00000572579 ZNF616Q08AN1 781 aa14□□□□□ -0.17
CHD3-214ENST00000572579 PSG5Q15238 335 aa14□□□□□ -0.17
CHD3-214ENST00000572579 SSX1Q16384 188 aa14□□□□□ -0.17
CHD3-214ENST00000572579 ECSCRQ19T08 205 aa14□□□□□ -0.17
CHD3-214ENST00000572579 MOGAT2Q3SYC2 334 aa14□□□□□ -0.17
CHD3-214ENST00000572579 MOB1BQ7L9L4 216 aa14□□□□□ -0.17
CHD3-214ENST00000572579 DLX4Q92988 240 aaPredicted RBP14□□□□□ -0.17
CHD3-214ENST00000572579 FAM3DQ96BQ1 224 aa14□□□□□ -0.17
CHD3-214ENST00000572579 FAM103A1Q9BTL3 118 aaKnown RBP14□□□□□ -0.17
CHD3-214ENST00000572579 TOLLIPQ9H0E2 274 aa14□□□□□ -0.17
CHD3-214ENST00000572579 A3GALT2U3KPV4 340 aa14□□□□□ -0.17
CHD3-214ENST00000572579 TMEM272A0A1B0GTI8 110 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 OR5H14A6NHG9 310 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 ZBTB25P24278 435 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 SLURP1P55000 103 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 OR10A3P58181 314 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 PRSS48Q7RTY5 328 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 C5orf30Q96GV9 206 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 CLCC1Q96S66 551 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 MGLLQ99685 303 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 ASCL2Q99929 193 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 URM1Q9BTM9 101 aaKnown RBP13.99□□□□□ -0.17
CHD3-214ENST00000572579 C12orf4Q9NQ89 552 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 KIAA1456Q9P272 454 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 WASHC3Q9Y3C0 194 aa13.99□□□□□ -0.17
CHD3-214ENST00000572579 A0A1W2PN81 502 aa13.98□□□□□ -0.17
CHD3-214ENST00000572579 ARPC1BO15143 372 aaKnown RBP13.98□□□□□ -0.17
CHD3-214ENST00000572579 OR8U8P0C7N1 319 aa13.98□□□□□ -0.17
CHD3-214ENST00000572579 MC5RP33032 325 aa13.98□□□□□ -0.17
CHD3-214ENST00000572579 CHRNA7P36544 502 aa13.98□□□□□ -0.17
CHD3-214ENST00000572579 HES5Q5TA89 166 aa13.98□□□□□ -0.17
CHD3-214ENST00000572579 CD200R1LQ6Q8B3 271 aa13.98□□□□□ -0.17
CHD3-214ENST00000572579 ZMAT5Q9UDW3 170 aaKnown RBP13.98□□□□□ -0.17
CHD3-214ENST00000572579 V9GY05 133 aa13.98□□□□□ -0.17
CHD3-214ENST00000572579 STAB2Q8WWQ8 2551 aa13.98□□□□□ -0.17
CHD3-214ENST00000572579 IGHV4OR15-8A0A075B7B6 117 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 A0A087WW49 117 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 A0A0B4J203 849 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 TRDCB7Z8K6 153 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 GSTP1P09211 210 aaKnown RBP13.97□□□□□ -0.17
CHD3-214ENST00000572579 ZNF562Q6V9R5 426 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 PPP1R27Q86WC6 154 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 NR2C2APQ86WQ0 139 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 WWC2-AS2Q96NR7 200 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 RNF5Q99942 180 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 CMSS1Q9BQ75 279 aaKnown RBP13.97□□□□□ -0.17
CHD3-214ENST00000572579 CCDC90BQ9GZT6 254 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 RDH8Q9NYR8 311 aa13.97□□□□□ -0.17
CHD3-214ENST00000572579 FOXA2Q9Y261 457 aaPredicted RBP13.97□□□□□ -0.17
CHD3-214ENST00000572579 ZNF256Q9Y2P7 627 aaPredicted RBP13.97□□□□□ -0.17
CHD3-214ENST00000572579 H7C2Y5 167 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 DENRO43583 198 aaKnown RBP13.96□□□□□ -0.17
CHD3-214ENST00000572579 ARL6IP5O75915 188 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 CA2P00918 260 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 IGLV2-23P01705 113 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 PJVKQ0ZLH3 352 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 TRAM1Q15629 374 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 MRGPRG-AS1Q2M3A8 158 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 IGSF11Q5DX21 431 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 LFNGQ8NES3 379 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 MS4A10Q96PG2 267 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 GHITMQ9H3K2 345 aa13.96□□□□□ -0.17
CHD3-214ENST00000572579 METTL1Q9UBP6 276 aaKnown RBP13.96□□□□□ -0.17
CHD3-214ENST00000572579 RAB27BO00194 218 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 OVOL1O14753 267 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 HSPA12AO43301 675 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 RBBP9O75884 186 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 IGHV3-11P01762 117 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 CRYGBP07316 175 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 NHLRC4P0CG21 123 aaPredicted RBP13.95□□□□□ -0.18
CHD3-214ENST00000572579 GSTT2P0CG29 244 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 GSTT2BP0CG30 244 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 PSMA1P25786 263 aaKnown RBP13.95□□□□□ -0.18
CHD3-214ENST00000572579 AKIRIN2Q53H80 203 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 EDARADDQ8WWZ3 215 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 MAFIPQ8WZ33 124 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 RHOVQ96L33 236 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 ACOT13Q9NPJ3 140 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 ZNF230Q9UIE0 474 aaPredicted RBP13.95□□□□□ -0.18
CHD3-214ENST00000572579 RAB22AQ9UL26 194 aa13.95□□□□□ -0.18
CHD3-214ENST00000572579 IGKV1D-8A0A087WSZ0 117 aa13.94□□□□□ -0.18
CHD3-214ENST00000572579 SRRM4A7MD48 611 aaKnown RBP13.94□□□□□ -0.18
CHD3-214ENST00000572579 LGALS1P09382 135 aaKnown RBP13.94□□□□□ -0.18
CHD3-214ENST00000572579 GNB3P16520 340 aa13.94□□□□□ -0.18
CHD3-214ENST00000572579 RPS16P62249 146 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms