RNA–Protein interactions for RNA: ENST00000572334.6

VPS53-213, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 5

Gene VPS53, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-213ENST00000572334 OOSP1A8MZH6 123 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 C1orf196B1AJZ1 125 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 J3QLW9 94 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 J3QR06 171 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 PLA2G10O15496 165 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 ZFPL1O95159 310 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 CYB5AP00167 134 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 IGHV3-7P01780 117 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 APOC3P02656 99 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 PF4P02776 101 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 SULT1A3P0DMM9 295 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 SULT1A4P0DMN0 295 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 ZNF44P15621 663 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 ZNF19P17023 458 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 ZNF20P17024 532 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 C21orf33P30042 268 aaPredicted RBP5.3□□□□□ -1.56
VPS53-213ENST00000572334 S100A11P31949 105 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 BRS3P32247 399 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 OR3A4PP47883 348 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 THBS3P49746 956 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 RAB5CP51148 216 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 ARHGDIBP52566 201 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 RPL23AP62750 156 aaKnown RBP5.3□□□□□ -1.56
VPS53-213ENST00000572334 DEFA5Q01523 94 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 FCN2Q15485 313 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 HMGN3Q15651 99 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 KISS1Q15726 138 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 ZNF124Q15973 351 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 ARSJQ5FYB0 599 aaPredicted RBP5.3□□□□□ -1.56
VPS53-213ENST00000572334 ASCL4Q6XD76 172 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 OR2W3Q7Z3T1 314 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 TOMM5Q8N4H5 51 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 DRAM1Q8N682 238 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 ACBD7Q8N6N7 88 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 NANOGP1Q8N7R0 232 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 CHST4Q8NCG5 386 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 PXT1Q8NFP0 134 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 OR4X2Q8NGF9 303 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 OR51A2Q8NGJ7 313 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 OR13C3Q8NGS6 347 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 OR2T35Q8NGX2 323 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 OR9G1Q8NH87 305 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 APH1BQ8WW43 257 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 RFKQ969G6 155 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 ORAI1Q96D31 301 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 CYYR1Q96J86 154 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 AKR1E2Q96JD6 320 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 C4orf36Q96KX1 117 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 P2RX4Q99571 388 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 ABCG5Q9H222 651 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 GHITMQ9H3K2 345 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 NCOR1P1Q9H4R4 102 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 RHOFQ9HBH0 211 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 TXNL4BQ9NX01 149 aaKnown RBP5.3□□□□□ -1.56
VPS53-213ENST00000572334 CALYQ9NYX4 217 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 LINC00527Q9UJ94 153 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 PSG11Q9UQ72 335 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 MOB4Q9Y3A3 225 aa5.3□□□□□ -1.56
VPS53-213ENST00000572334 TRAV39A0A0B4J263 110 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 A0A1W2PPE3 182 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 DAPL1A0PJW8 107 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 PSMB11A5LHX3 300 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 DISC1C4P0D8 188 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 C15orf65H3BRN8 121 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 GABRPO00591 440 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 HSPB6O14558 160 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 DEGS1O15121 323 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 CREBL2O60519 120 aaPredicted RBP5.29□□□□□ -1.56
VPS53-213ENST00000572334 GPX5O75715 221 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 IGHG2P01859 326 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 VSIG8P0DPA2 414 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 FOLR2P14207 255 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 BTF3P20290 206 aaKnown RBP5.29□□□□□ -1.56
VPS53-213ENST00000572334 VAMP1P23763 118 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 NFYBP25208 207 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 SSTR5P35346 364 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 ATP6V1E1P36543 226 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 CEACAM3P40198 252 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 MTNR1BP49286 362 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 PRRX1P54821 245 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 WNT4P56705 351 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 RAB2AP61019 212 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 RAB40BQ12829 278 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 TPBGQ13641 420 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 EBI3Q14213 229 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 RBM39Q14498 530 aaKnown RBP5.29□□□□□ -1.56
VPS53-213ENST00000572334 PIGYQ3MUY2 71 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 LGALSLQ3ZCW2 172 aaPredicted RBP5.29□□□□□ -1.56
VPS53-213ENST00000572334 C9orf152Q5JTZ5 239 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 IDNKQ5T6J7 187 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 CNIH2Q6PI25 160 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 C8orf86Q6ZUL3 223 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 Q8N6K4 173 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 OR4D6Q8NGJ1 314 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 OR10K1Q8NGX5 313 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 RFESDQ8TAC1 157 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 SFT2D1Q8WV19 159 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 LINC00052Q96N35 136 aa5.29□□□□□ -1.56
VPS53-213ENST00000572334 TSNAXQ99598 290 aaKnown RBP5.29□□□□□ -1.56
VPS53-213ENST00000572334 PDCD1LG2Q9BQ51 273 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms