RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 SEC22AQ96IW7 307 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 OR8B4Q96RC9 309 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 FOXC2Q99958 501 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 KCTD14Q9BQ13 255 aaPredicted RBP2.78□□□□□ -1.96
CDC27-213ENST00000571643 AGMATQ9BSE5 352 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 HCAR1Q9BXC0 346 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 SLC19A3Q9BZV2 496 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 FNDC4Q9H6D8 234 aaPredicted RBP2.78□□□□□ -1.96
CDC27-213ENST00000571643 NANOGQ9H9S0 305 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 SIAEQ9HAT2 523 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 ACOT13Q9NPJ3 140 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 ZNF107Q9UII5 783 aaPredicted RBP2.78□□□□□ -1.96
CDC27-213ENST00000571643 OR52A1Q9UKL2 312 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 HHLA2Q9UM44 414 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 L3MBTL1Q9Y468 752 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 KCNE3Q9Y6H6 103 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 DOPEY2Q9Y3R5 2298 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 CACNA1CQ13936 2221 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 MED12LQ86YW9 2145 aa2.78□□□□□ -1.96
CDC27-213ENST00000571643 ICE1Q9Y2F5 2266 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 INTS1Q8N201 2190 aaKnown RBP2.77□□□□□ -1.97
CDC27-213ENST00000571643 PTPN13Q12923 2485 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 TMED7-TICAM2A0A0A6YYA0 188 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 TINCRA0A1B0GVN0 87 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 SMIM9A6NGZ8 99 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 ZNF98A6NK75 572 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 MPTX1A8MV57 137 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 BHLHE40O14503 412 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 MRASO14807 208 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 SLC31A2O15432 143 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 CHP2O43745 196 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 SS18L1O75177 396 aaPredicted RBP2.77□□□□□ -1.97
CDC27-213ENST00000571643 TNFSF13O75888 250 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 CCNKO75909 580 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 SLC22A5O76082 557 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 CNIH1O95406 144 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 FAM107AO95990 144 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 SLC2A2P11168 524 aaPredicted RBP2.77□□□□□ -1.97
CDC27-213ENST00000571643 IFI30P13284 250 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 RAB5AP20339 215 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 PSMB1P20618 241 aaKnown RBP2.77□□□□□ -1.97
CDC27-213ENST00000571643 CXCR1P25024 350 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 RPL5P46777 297 aaKnown RBP2.77□□□□□ -1.97
CDC27-213ENST00000571643 ZNF136P52737 540 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 CTBP2P56545 445 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 CLDN12P56749 244 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 CDC42P60953 191 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 ESRRGP62508 458 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 RBX1P62877 108 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 PAFAH1B2P68402 229 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 TGFBR3Q03167 851 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 TFF3Q07654 80 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 CYP51A1Q16850 503 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 LRRC36Q1X8D7 754 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 CLEC12BQ2HXU8 276 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 PAGE3Q5JUK9 113 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 MRPL2Q5T653 305 aaKnown RBP2.77□□□□□ -1.97
CDC27-213ENST00000571643 HIST2H3PS2Q5TEC6 136 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 FAM19A5Q7Z5A7 132 aaPredicted RBP2.77□□□□□ -1.97
CDC27-213ENST00000571643 FAM19A1Q7Z5A9 133 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 CALHM3Q86XJ0 350 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 MSRB3Q8IXL7 192 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 Q8N377 158 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 CLDN22Q8N7P3 220 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 OR8G5Q8NG78 346 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 OR52E4Q8NGH9 312 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 OR9I1Q8NGQ6 314 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 OR2G2Q8NGZ5 317 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 OR6F1Q8NGZ6 308 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 OR8U1Q8NH10 309 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 OR10D3Q8NH80 312 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 MFSD8Q8NHS3 518 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 ZNF563Q8TA94 476 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 C10orf82Q8WW14 230 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 RAB3CQ96E17 227 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 BTF3L4Q96K17 158 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 OXGR1Q96P68 337 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 RCHY1Q96PM5 261 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 NKX3-1Q99801 234 aaPredicted RBP2.77□□□□□ -1.97
CDC27-213ENST00000571643 CHIAQ9BZP6 476 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 PPDPFQ9H3Y8 114 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 ZNF226Q9NYT6 803 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 COMMD9Q9P000 198 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 ZNF443Q9Y2A4 671 aaPredicted RBP2.77□□□□□ -1.97
CDC27-213ENST00000571643 GOLT1BQ9Y3E0 138 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 SELENOKQ9Y6D0 94 aa2.77□□□□□ -1.97
CDC27-213ENST00000571643 SPTAN1Q13813 2472 aaKnown RBP2.77□□□□□ -1.97
CDC27-213ENST00000571643 FLNBO75369 2602 aaKnown RBP2.76□□□□□ -1.97
CDC27-213ENST00000571643 KIAA1549Q9HCM3 1950 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 COL12A1Q99715 3063 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 A0A087WUJ7 227 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 A0A0J9YW62 118 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 TRBV4-1A0A0J9YWV2 114 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 A0A1B0GW55 424 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 TRAPPC13A5PLN9 417 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 OR6C6A6NF89 314 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 METTL15A6NJ78 407 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 RFPL4AA6NLU0 287 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 CLDN24A6NM45 220 aa2.76□□□□□ -1.97
CDC27-213ENST00000571643 SNURFLB1AK76 121 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms