RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 ADTRPQ96IZ2 230 aa16.02■□□□□ 0.16
RPAIN-210ENST00000571613 PRELID3BQ9Y3B1 194 aa16.02■□□□□ 0.16
RPAIN-210ENST00000571613 RBFOX2O43251 390 aaKnown RBP eCLIP16.02■□□□□ 0.15
RPAIN-210ENST00000571613 DUTP33316 252 aaKnown RBP16.02■□□□□ 0.15
RPAIN-210ENST00000571613 RPL30P62888 115 aaKnown RBP16.02■□□□□ 0.15
RPAIN-210ENST00000571613 ID3Q02535 119 aa16.02■□□□□ 0.15
RPAIN-210ENST00000571613 ZNF273Q14593 569 aa16.02■□□□□ 0.15
RPAIN-210ENST00000571613 ZNF843Q8N446 348 aa16.02■□□□□ 0.15
RPAIN-210ENST00000571613 ZNF439Q8NDP4 499 aa16.02■□□□□ 0.15
RPAIN-210ENST00000571613 GPR146Q96CH1 333 aa16.02■□□□□ 0.15
RPAIN-210ENST00000571613 C5orf30Q96GV9 206 aa16.02■□□□□ 0.15
RPAIN-210ENST00000571613 UBTD1Q9HAC8 227 aa16.02■□□□□ 0.15
RPAIN-210ENST00000571613 ZC4H2Q9NQZ6 224 aa16.02■□□□□ 0.15
RPAIN-210ENST00000571613 COA4Q9NYJ1 87 aa16.02■□□□□ 0.15
RPAIN-210ENST00000571613 MMP24Q9Y5R2 645 aa16.02■□□□□ 0.15
RPAIN-210ENST00000571613 LYNX1G3V0Z9 82 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 IGKV1-39P01597 117 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 IGKV1D-39P04432 117 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 LYNX1P0DP58 116 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 RPL12P30050 165 aaKnown RBP16.01■□□□□ 0.15
RPAIN-210ENST00000571613 ZNF134P52741 427 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 RAB14P61106 215 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 EIF5AP63241 154 aaKnown RBP16.01■□□□□ 0.15
RPAIN-210ENST00000571613 EXOSC2Q13868 293 aaKnown RBP16.01■□□□□ 0.15
RPAIN-210ENST00000571613 CT45A1Q5HYN5 189 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 SLC25A48Q6ZT89 311 aaKnown RBP16.01■□□□□ 0.15
RPAIN-210ENST00000571613 FGFRL1Q8N441 504 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 C8orf31Q8N9H6 132 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 OR8B3Q8NGG8 313 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 CT45A3Q8NHU0 189 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 OR8B2Q96RD0 313 aa16.01■□□□□ 0.15
RPAIN-210ENST00000571613 F5H0A9 414 aaPredicted RBP16■□□□□ 0.15
RPAIN-210ENST00000571613 WRBO00258 174 aa16■□□□□ 0.15
RPAIN-210ENST00000571613 PITX3O75364 302 aa16■□□□□ 0.15
RPAIN-210ENST00000571613 PRAMEF5Q5TYX0 476 aa16■□□□□ 0.15
RPAIN-210ENST00000571613 BTNL3Q6UXE8 466 aa16■□□□□ 0.15
RPAIN-210ENST00000571613 PHYHIPLQ96FC7 376 aa16■□□□□ 0.15
RPAIN-210ENST00000571613 NEIL1Q96FI4 390 aaPredicted RBP16■□□□□ 0.15
RPAIN-210ENST00000571613 BBC3Q96PG8 261 aaPredicted RBP16■□□□□ 0.15
RPAIN-210ENST00000571613 S1PR3Q99500 378 aa16■□□□□ 0.15
RPAIN-210ENST00000571613 SPOCK3Q9BQ16 436 aa16■□□□□ 0.15
RPAIN-210ENST00000571613 ZNF471Q9BX82 626 aaPredicted RBP16■□□□□ 0.15
RPAIN-210ENST00000571613 M0R1X1 148 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 PPIHO43447 177 aaKnown RBP15.99■□□□□ 0.15
RPAIN-210ENST00000571613 HKR1P10072 659 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 HTR2BP41595 481 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 THBS3P49746 956 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 ARHGDIBP52566 201 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 A0A1W2PPR1 153 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 FAM90A26D6RGX4 464 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 GPR137BO60478 399 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 FCN3O75636 299 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 HPRT1P00492 218 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 F12P00748 615 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-210ENST00000571613 VAMP2P63027 116 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 OR8H3Q8N146 312 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 SCARB1Q8WTV0 552 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 ST8SIA2Q92186 375 aa15.99■□□□□ 0.15
RPAIN-210ENST00000571613 RCL1Q9Y2P8 373 aaKnown RBP15.99■□□□□ 0.15
RPAIN-210ENST00000571613 NBEAQ8NFP9 2946 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 LINC00473A8K010 186 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 C17orf98A8MV24 154 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 ATP6V1G1O75348 118 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 CFDP00746 253 aaPredicted RBP15.98■□□□□ 0.15
RPAIN-210ENST00000571613 IGKV1-5P01602 117 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 RBP4P02753 201 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 TLE4Q04727 773 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 ZNF841Q6ZN19 808 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 LYG1Q8N1E2 194 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 STOML3Q8TAV4 291 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 GSX2Q9BZM3 304 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 SLC25A31Q9H0C2 315 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 CACNG5Q9UF02 275 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 USP24Q9UPU5 2620 aa15.98■□□□□ 0.15
RPAIN-210ENST00000571613 hCG_1809904A0A1W2PP81 198 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 A0A1W2PPE2 198 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 A0A1W2PR64 198 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 A0A1W2PRV1 198 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 MSGN1A6NI15 193 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 SLC31A2O15432 143 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 RAMP3O60896 148 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 PROP1O75360 226 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 PRB1P04280 392 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 TPT1P13693 172 aaKnown RBP15.97■□□□□ 0.15
RPAIN-210ENST00000571613 CCL3L1P16619 93 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 EPHA1P21709 976 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 EFNA4P52798 201 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 ZNF816Q0VGE8 651 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-210ENST00000571613 LINC00311Q8N616 119 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 DMBX1Q8NFW5 382 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 RAB40CQ96S21 281 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 CACFD1Q9UGQ2 172 aa15.97■□□□□ 0.15
RPAIN-210ENST00000571613 A0A087X0M5 115 aa15.96■□□□□ 0.15
RPAIN-210ENST00000571613 SAA2-SAA4A0A096LPE2 208 aa15.96■□□□□ 0.15
RPAIN-210ENST00000571613 A0A0G2JRQ6 117 aa15.96■□□□□ 0.15
RPAIN-210ENST00000571613 A0A1B0GX30 115 aa15.96■□□□□ 0.15
RPAIN-210ENST00000571613 FAM90A9PA6NNJ1 464 aa15.96■□□□□ 0.15
RPAIN-210ENST00000571613 TOR1AO14656 332 aa15.96■□□□□ 0.15
RPAIN-210ENST00000571613 MMP23AO75900 390 aa15.96■□□□□ 0.15
RPAIN-210ENST00000571613 SPDEFO95238 335 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms