RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 LUMP51884 338 aaPredicted RBP16.54■□□□□ 0.24
VPS53-210ENST00000571456 DYRK1AQ13627 763 aa16.54■□□□□ 0.24
VPS53-210ENST00000571456 MSMO1Q15800 293 aa16.54■□□□□ 0.24
VPS53-210ENST00000571456 FAM53AQ6NSI3 398 aaPredicted RBP16.54■□□□□ 0.24
VPS53-210ENST00000571456 FAM131AQ6UXB0 335 aa16.54■□□□□ 0.24
VPS53-210ENST00000571456 CCDC190Q86UF4 302 aa16.54■□□□□ 0.24
VPS53-210ENST00000571456 ODF3L1Q8IXM7 274 aa16.54■□□□□ 0.24
VPS53-210ENST00000571456 OR52I2Q8NH67 350 aa16.54■□□□□ 0.24
VPS53-210ENST00000571456 GIMAP1Q8WWP7 306 aa16.54■□□□□ 0.24
VPS53-210ENST00000571456 MEIS3P1A6NDR6 274 aa16.53■□□□□ 0.24
VPS53-210ENST00000571456 ZNF736B4DX44 427 aaPredicted RBP16.53■□□□□ 0.24
VPS53-210ENST00000571456 CRYBA1P05813 215 aa16.53■□□□□ 0.24
VPS53-210ENST00000571456 TAGLNQ01995 201 aaKnown RBP16.53■□□□□ 0.24
VPS53-210ENST00000571456 DHRS11Q6UWP2 260 aa16.53■□□□□ 0.24
VPS53-210ENST00000571456 PIFOQ8TCI5 191 aa16.53■□□□□ 0.24
VPS53-210ENST00000571456 CHIAQ9BZP6 476 aa16.53■□□□□ 0.24
VPS53-210ENST00000571456 RBMX2Q9Y388 322 aaKnown RBP16.53■□□□□ 0.24
VPS53-210ENST00000571456 TIMM23O14925 209 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 CSF1P09603 554 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 OR8U9P0C7N5 309 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 MC5RP33032 325 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 TAS2R19P59542 299 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 EBI3Q14213 229 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 VAX1Q5SQQ9 334 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 MOB3BQ86TA1 216 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 TMEM17Q86X19 198 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 LYSMD2Q8IV50 215 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 TMEM229BQ8NBD8 167 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 OR8U1Q8NH10 309 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 DEDD2Q8WXF8 326 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 CFHR4Q92496 578 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 OR2D2Q9H210 308 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 EHFQ9NZC4 300 aa16.52■□□□□ 0.24
VPS53-210ENST00000571456 A6NDX4 124 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 OR5H14A6NHG9 310 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 M0QZK8 103 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 FCGR2CP31995 323 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 ARRDC1Q8N5I2 433 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 DRAM1Q8N682 238 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 ZNF645Q8N7E2 425 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 ZBTB34Q8NCN2 500 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 OR6F1Q8NGZ6 308 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 OR56B4Q8NH76 319 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 CAPSLQ8WWF8 208 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 ABHD14BQ96IU4 210 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 ADTRPQ96IZ2 230 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 ZNF251Q9BRH9 671 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 PARP12Q9H0J9 701 aaKnown RBP16.51■□□□□ 0.23
VPS53-210ENST00000571456 PTTG2Q9NZH5 202 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 KLK11Q9UBX7 282 aa16.51■□□□□ 0.23
VPS53-210ENST00000571456 GPR137BO60478 399 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 PPYP01298 95 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 HKR1P10072 659 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 NFYAP23511 347 aaPredicted RBP16.5■□□□□ 0.23
VPS53-210ENST00000571456 HRH1P35367 487 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 HERV-K104P61576 105 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 DGCR2P98153 550 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 DIAPH2-AS1Q14236 149 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 CNPY1Q3B7I2 92 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 RNASE10Q5GAN6 216 aaKnown RBP16.5■□□□□ 0.23
VPS53-210ENST00000571456 OR8H1Q8NGG4 311 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 OR2T10Q8NGZ9 312 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 RANBP3Q9H6Z4 567 aaPredicted RBP16.5■□□□□ 0.23
VPS53-210ENST00000571456 V9GYH0 126 aa16.5■□□□□ 0.23
VPS53-210ENST00000571456 OR2F2O95006 317 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 CD74P04233 296 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 IFNA6P05013 189 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 HLA-DMAP28067 261 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 REG1BP48304 166 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 RAB13P51153 203 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 TSPAN5P62079 268 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 ZNF45Q02386 682 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 LSAMPQ13449 338 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 MEF2DQ14814 521 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 DHRS7BQ6IAN0 325 aaPredicted RBP16.49■□□□□ 0.23
VPS53-210ENST00000571456 DUX5Q96PT3 197 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 NABP2Q9BQ15 211 aa16.49■□□□□ 0.23
VPS53-210ENST00000571456 FAM181BA6NEQ2 426 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 PMP2P02689 132 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 PAX6P26367 422 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 RFX2P48378 723 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 AP3S2P59780 193 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 ZNF660Q6AZW8 331 aaPredicted RBP16.48■□□□□ 0.23
VPS53-210ENST00000571456 LPCAT3Q6P1A2 487 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 GDPD1Q8N9F7 314 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 OR5AN1Q8NGI8 311 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 RBM14Q96PK6 669 aaKnown RBP16.48■□□□□ 0.23
VPS53-210ENST00000571456 RNF5Q99942 180 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 NPFFR1Q9GZQ6 430 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 SDHAF2Q9NX18 166 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 C1RLQ9NZP8 487 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 RNF150Q9ULK6 438 aa16.48■□□□□ 0.23
VPS53-210ENST00000571456 RYR3Q15413 4870 aa16.47■□□□□ 0.23
VPS53-210ENST00000571456 A0A1B0GUS0 222 aa16.47■□□□□ 0.23
VPS53-210ENST00000571456 NDUFA7O95182 113 aa16.47■□□□□ 0.23
VPS53-210ENST00000571456 MOSP00540 346 aa16.47■□□□□ 0.23
VPS53-210ENST00000571456 IGKV1D-33P01593 117 aa16.47■□□□□ 0.23
VPS53-210ENST00000571456 IGKV1-33P01594 117 aa16.47■□□□□ 0.23
VPS53-210ENST00000571456 APOA2P02652 100 aa16.47■□□□□ 0.23
VPS53-210ENST00000571456 SNRNP70P08621 437 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms