RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 A8MV72 311 aaPredicted RBP5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 ODF3BA8MYP8 253 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 RNASEK-C17orf49H0YIS7 233 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 NPFFO15130 113 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 SLC31A2O15432 143 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 TNFSF12O43508 249 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 DHFRP00374 187 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 IGHV1-69P01742 117 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 HLA-AP01891 365 aaKnown RBP5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 TCRBP04435 133 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 CTSDP07339 412 aaPredicted RBP5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF735P0CB33 412 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 CD99P14209 185 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 FOSL1P15407 271 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 AKR1C4P17516 323 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 PI3P19957 117 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 SAA4P35542 130 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 THBS3P49746 956 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 RAB13P51153 203 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 UCP3P55916 312 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 DLX1P56177 255 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 PIGPP57054 158 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 MSMO1Q15800 293 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 MIDNQ504T8 468 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 RPL39P5Q59GN2 51 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 CT45A1Q5HYN5 189 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 MINOS1Q5TGZ0 78 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF660Q6AZW8 331 aaPredicted RBP5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF818PQ6ZRF7 136 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 LHFPL1Q86WI0 220 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 SGPP2Q8IWX5 399 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 C11orf42Q8N5U0 333 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 LINC00311Q8N616 119 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 DRAM1Q8N682 238 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZBTB34Q8NCN2 500 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 OR4P4Q8NGL7 312 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 OR51H1Q8NH63 302 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 CT45A3Q8NHU0 189 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 NANPQ8TBE9 248 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 ADTRPQ96IZ2 230 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 AKR1E2Q96JD6 320 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 HSD17B10Q99714 261 aaKnown RBP5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 MS4A7Q9GZW8 240 aaPredicted RBP5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 GPN1Q9HCN4 374 aaPredicted RBP5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 CCL28Q9NRJ3 127 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 SLC2A9Q9NRM0 540 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 DPM3Q9P2X0 92 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 PRELID3BQ9Y3B1 194 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 MINOS1-NBL1R4GNA1 71 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 USF3Q68DE3 2245 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 DCHS2Q6V1P9 2916 aa5.36□□□□□ -1.55
CTDNEP1-204ENST00000570484 ANKRD17O75179 2603 aaKnown RBP5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 PIGBOS1A0A0B4J2F0 54 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 BTBD17A6NE02 478 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 OOSP1A8MZH6 123 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 INMT-MINDY4F8WBC2 141 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 BUB1B-PAK6H3BSN5 160 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 H7C2Y5 167 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 PRAF2O60831 178 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 PEX14O75381 377 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 B3GALNT1O75752 331 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 IGLV1-47P01700 117 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 GAPDHP04406 335 aaKnown RBP5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 SERPINE2P07093 398 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 FBP1P09467 338 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 KIR2DS2P43631 304 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 REG1BP48304 166 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 RAB25P57735 213 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 BPIFB3P59826 476 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 UBE2MP61081 183 aaKnown RBP5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 SRPXP78539 464 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 RTL8BQ17RB0 113 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 ANKRD39Q53RE8 183 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 TPTE2P1Q5T6R2 138 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 RUSC1-AS1Q66K80 236 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 FAM53AQ6NSI3 398 aaPredicted RBP5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 CLEC9AQ6UXN8 241 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 BRD3OSQ6XYD6 125 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF66Q6ZN08 573 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNF833PQ6ZTB9 187 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 MOB3BQ86TA1 216 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 OR8H3Q8N146 312 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 BVESQ8NE79 360 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 RNASE11Q8TAA1 199 aaKnown RBP5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 RNF141Q8WVD5 230 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 RTN4IP1Q8WWV3 396 aaPredicted RBP5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 MRPL20Q9BYC9 149 aaKnown RBP5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 SDHAF2Q9NX18 166 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 ZNRD1Q9P1U0 126 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 NUP50Q9UKX7 468 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 VSIG4Q9Y279 399 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 KCNIP3Q9Y2W7 256 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 HILPDAQ9Y5L2 63 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 U3KQE9 123 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 ABCA12Q86UK0 2595 aa5.35□□□□□ -1.55
CTDNEP1-204ENST00000570484 CENPVL3A0A0U1RRI6 287 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 C3orf85A0A1B0GTC6 90 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 H0Y980 276 aa5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 CREBL2O60519 120 aaPredicted RBP5.34□□□□□ -1.55
CTDNEP1-204ENST00000570484 ATG12O94817 140 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms