RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 WSB1Q9Y6I7 421 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 CACNA1AO00555 2505 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 CEP250Q9BV73 2442 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 KRBOX1C9JBD0 128 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 PSPNO60542 156 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 THBDP07204 575 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 NQO2P16083 231 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 CXCL2P19875 107 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 RAB11AP62491 216 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 IFITM2Q01629 132 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 LYZL2Q7Z4W2 148 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 RTN4RL2Q86UN3 420 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 NUP50Q9UKX7 468 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 RCL1Q9Y2P8 373 aaKnown RBP5.04□□□□□ -1.6
CYLD-216ENST00000569891 FBXO7Q9Y3I1 522 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 KMT2CQ8NEZ4 4911 aaKnown RBP5.04□□□□□ -1.6
CYLD-216ENST00000569891 STARD9Q9P2P6 4700 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 IGKV1D-17A0A075B6S4 117 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 IGHV3-64DA0A0J9YX35 117 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 WISP2O76076 250 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 HBE1P02100 147 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 RBP4P02753 201 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 EPHA1P21709 976 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 OMGP23515 440 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 UQCC3Q6UW78 93 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 CD177Q8N6Q3 437 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 ZNF709Q8N972 641 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 TMEM186Q96B77 213 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 PBDC1Q9BVG4 233 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 HEATR1Q9H583 2144 aaKnown RBP5.04□□□□□ -1.6
CYLD-216ENST00000569891 RYR3Q15413 4870 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 SVILO95425 2214 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 CHD6Q8TD26 2715 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 MYO7BQ6PIF6 2116 aa5.04□□□□□ -1.6
CYLD-216ENST00000569891 TRAV14DV4A0A0A6YYC5 116 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 TRIM77I1YAP6 450 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 M0R1X1 148 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 PRH1P02810 166 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 MC5RP33032 325 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 RAB31Q13636 194 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 TMEM155Q4W5P6 130 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 PRAMEF5Q5TYX0 476 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 LILRB2Q8N423 598 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 C8orf31Q8N9H6 132 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 COQ2Q96H96 371 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 OR10C1Q96KK4 312 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 TP53RKQ96S44 253 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 BARX1Q9HBU1 254 aaPredicted RBP5.03□□□□□ -1.6
CYLD-216ENST00000569891 OR1A1Q9P1Q5 309 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 BTBD17A6NE02 478 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 SYNGR2O43760 224 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 CYB5R3P00387 301 aaPredicted RBP5.03□□□□□ -1.6
CYLD-216ENST00000569891 GYPAP02724 150 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 NFYBP25208 207 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 CEACAM3P40198 252 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 TMEM33P57088 247 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 HERPUD1Q15011 391 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 COMMD7Q86VX2 200 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 UBAC2Q8NBM4 344 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 OR13A1Q8NGR1 328 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 OR10X1Q8NGY0 326 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 NEIL1Q96FI4 390 aaPredicted RBP5.03□□□□□ -1.6
CYLD-216ENST00000569891 CCL13Q99616 98 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 UNKLQ9H9P5 680 aaKnown RBP5.03□□□□□ -1.6
CYLD-216ENST00000569891 IGHV3OR15-7A0A075B7D8 119 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 CEBPZOSA8MTT3 80 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 SHISA9B4DS77 424 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 E7EQL1 145 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 C17orf112F2Z3M2 114 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 PITX3O75364 302 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 FGF2P09038 288 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 SEC11BP0C7V7 166 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 ERVFRD-1P60508 538 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 MORN2Q502X0 79 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 DPPA3Q6W0C5 159 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 OR52L2PQ8NGH6 319 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 LINC01560Q8TB33 94 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 RALYQ9UKM9 306 aaKnown RBP5.03□□□□□ -1.6
CYLD-216ENST00000569891 VPS13DQ5THJ4 4388 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 NKX2-6A6NCS4 301 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 TNFSF12O43508 249 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 MBP02144 154 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 PPP1CCP36873 323 aaKnown RBP5.03□□□□□ -1.6
CYLD-216ENST00000569891 CEBPDP49716 269 aaPredicted RBP5.03□□□□□ -1.6
CYLD-216ENST00000569891 C2orf68Q2NKX9 166 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 AKR1C8PQ5T2L2 129 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 IL34Q6ZMJ4 242 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 C20orf204Q6ZNR8 217 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 ZNF596Q8TC21 504 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 MARVELD3Q96A59 401 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 SMIM8Q96KF7 97 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 GAFA1Q96PS6 74 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 LYRM2Q9NU23 88 aaPredicted RBP5.03□□□□□ -1.6
CYLD-216ENST00000569891 PRNDQ9UKY0 176 aa5.03□□□□□ -1.6
CYLD-216ENST00000569891 RNF222A6NCQ9 220 aa5.02□□□□□ -1.61
CYLD-216ENST00000569891 CYB5BO43169 146 aa5.02□□□□□ -1.61
CYLD-216ENST00000569891 ZG16O60844 167 aa5.02□□□□□ -1.61
CYLD-216ENST00000569891 EGR1P18146 543 aa5.02□□□□□ -1.61
CYLD-216ENST00000569891 F2RL1P55085 397 aa5.02□□□□□ -1.61
CYLD-216ENST00000569891 TLE4Q04727 773 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms