RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 CXorf66Q5JRM2 361 aaPredicted RBP15.91■□□□□ 0.14
CLK3-225ENST00000569063 GLDNQ6ZMI3 551 aaPredicted RBP15.91■□□□□ 0.14
CLK3-225ENST00000569063 C8orf86Q6ZUL3 223 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 ZNF695Q8IW36 515 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 MRPL41Q8IXM3 137 aaKnown RBP15.91■□□□□ 0.14
CLK3-225ENST00000569063 KLHL30-AS1Q8NEE0 82 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 KCTD7Q96MP8 289 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 RNF5Q99942 180 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 CABLES2Q9BTV7 478 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 OR51J1Q9H342 316 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.91■□□□□ 0.144e-6■■■□□ 18.6
CLK3-225ENST00000569063 KIAA1456Q9P272 454 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 ZNF221Q9UK13 617 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 WASHC3Q9Y3C0 194 aa15.91■□□□□ 0.14
CLK3-225ENST00000569063 TRBV6-7A0A0A0MS04 114 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 IGHV7-81A0A0B4J1V7 117 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 NUDT19A8MXV4 375 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 RBBP9O75884 186 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 MYCNOSP40205 109 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 CDX1P47902 265 aaPredicted RBP15.9■□□□□ 0.14
CLK3-225ENST00000569063 IGSF11Q5DX21 431 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 FOXB2Q5VYV0 432 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 Q6ZS49 121 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.9■□□□□ 0.14
CLK3-225ENST00000569063 OR10J5Q8NHC4 309 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 CENPOQ9BU64 300 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 ZNF230Q9UIE0 474 aaPredicted RBP15.9■□□□□ 0.14
CLK3-225ENST00000569063 DAPK2Q9UIK4 370 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 GAB2Q9UQC2 676 aa15.9■□□□□ 0.14
CLK3-225ENST00000569063 H7C2Y5 167 aa15.89■□□□□ 0.13
CLK3-225ENST00000569063 PRB2P02812 416 aaPredicted RBP15.89■□□□□ 0.13
CLK3-225ENST00000569063 PSMB8P28062 276 aa15.89■□□□□ 0.13
CLK3-225ENST00000569063 SDC2P34741 201 aa15.89■□□□□ 0.13
CLK3-225ENST00000569063 TALDO1P37837 337 aa15.89■□□□□ 0.13
CLK3-225ENST00000569063 ARFRP1Q13795 201 aa15.89■□□□□ 0.13
CLK3-225ENST00000569063 NEDD8Q15843 81 aa15.89■□□□□ 0.13
CLK3-225ENST00000569063 SFXN4Q6P4A7 337 aa15.89■□□□□ 0.13
CLK3-225ENST00000569063 P2RX4Q99571 388 aa15.89■□□□□ 0.13
CLK3-225ENST00000569063 RRHO14718 337 aa15.88■□□□□ 0.13
CLK3-225ENST00000569063 BET1O15155 118 aa15.88■□□□□ 0.13
CLK3-225ENST00000569063 ATP6V0E1O15342 81 aa15.88■□□□□ 0.13
CLK3-225ENST00000569063 GSTP1P09211 210 aaKnown RBP15.88■□□□□ 0.13
CLK3-225ENST00000569063 CD36P16671 472 aa15.88■□□□□ 0.13
CLK3-225ENST00000569063 PPIFP30405 207 aaKnown RBP15.88■□□□□ 0.13
CLK3-225ENST00000569063 CDNFQ49AH0 187 aa15.88■□□□□ 0.13
CLK3-225ENST00000569063 LCNL1Q6ZST4 164 aa15.88■□□□□ 0.13
CLK3-225ENST00000569063 ZNF383Q8NA42 475 aa15.88■□□□□ 0.13
CLK3-225ENST00000569063 DRAXINQ8NBI3 349 aaPredicted RBP15.88■□□□□ 0.13
CLK3-225ENST00000569063 MAFIPQ8WZ33 124 aa15.88■□□□□ 0.13
CLK3-225ENST00000569063 SCGNO76038 276 aa15.87■□□□□ 0.13
CLK3-225ENST00000569063 TFAP2AP05549 437 aa15.87■□□□□ 0.13
CLK3-225ENST00000569063 SNRPBP14678 240 aaKnown RBP15.87■□□□□ 0.13
CLK3-225ENST00000569063 DTYMKP23919 212 aa15.87■□□□□ 0.13
CLK3-225ENST00000569063 HACD4Q5VWC8 232 aa15.87■□□□□ 0.13
CLK3-225ENST00000569063 ZNF660Q6AZW8 331 aaPredicted RBP15.87■□□□□ 0.13
CLK3-225ENST00000569063 MYOZ3Q8TDC0 251 aa15.87■□□□□ 0.13
CLK3-225ENST00000569063 FBXL15Q9H469 300 aa15.87■□□□□ 0.13
CLK3-225ENST00000569063 RNF167Q9H6Y7 350 aa15.87■□□□□ 0.13
CLK3-225ENST00000569063 ELF5Q9UKW6 265 aaPredicted RBP15.87■□□□□ 0.13
CLK3-225ENST00000569063 WSB1Q9Y6I7 421 aa15.87■□□□□ 0.13
CLK3-225ENST00000569063 PRKDCP78527 4128 aaKnown RBP15.87■□□□□ 0.13
CLK3-225ENST00000569063 LOC100506127A0A0U1RQW1 187 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 G3V318 75 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 IGLV1-40P01703 118 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 IGKV1-16P04430 117 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 OR8U9P0C7N5 309 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 CRIP2P52943 208 aaPredicted RBP15.86■□□□□ 0.13
CLK3-225ENST00000569063 SCAND1P57086 179 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 LINC00205P59089 165 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 PDPNQ86YL7 162 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 OR8U1Q8NH10 309 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 RAX2Q96IS3 184 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 PARP11Q9NR21 331 aa15.86■□□□□ 0.13
CLK3-225ENST00000569063 AURKAIP1Q9NWT8 199 aaPredicted RBP15.86■□□□□ 0.13
CLK3-225ENST00000569063 IGKV1D-8A0A087WSZ0 117 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 TRAV41A0A0B4J266 112 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 M0R1X1 148 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 CCL24O00175 119 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 CLEC2LP0C7M8 214 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 MXD1Q05195 221 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 PSG5Q15238 335 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 MINDY2Q8NBR6 621 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 LGALS14Q8TCE9 139 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 OR2D2Q9H210 308 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 DCSTAMPQ9H295 470 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 SDHAF2Q9NX18 166 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 NOTCH3Q9UM47 2321 aa15.85■□□□□ 0.13
CLK3-225ENST00000569063 FCN1O00602 326 aa15.84■□□□□ 0.13
CLK3-225ENST00000569063 SPDEFO95238 335 aa15.84■□□□□ 0.13
CLK3-225ENST00000569063 APOA2P02652 100 aa15.84■□□□□ 0.13
CLK3-225ENST00000569063 CX3CL1P78423 397 aa15.84■□□□□ 0.13
CLK3-225ENST00000569063 PITPNAQ00169 270 aa15.84■□□□□ 0.13
CLK3-225ENST00000569063 KIAA0141Q14154 515 aaPredicted RBP15.84■□□□□ 0.13
CLK3-225ENST00000569063 PLGLAQ15195 96 aa15.84■□□□□ 0.13
CLK3-225ENST00000569063 ZNF260Q3ZCT1 412 aa15.84■□□□□ 0.13
CLK3-225ENST00000569063 C19orf54Q5BKX5 351 aa15.84■□□□□ 0.13
CLK3-225ENST00000569063 H1FOOQ8IZA3 346 aaPredicted RBP15.84■□□□□ 0.13
CLK3-225ENST00000569063 C4orf3Q8WVX3 66 aa15.84■□□□□ 0.13
CLK3-225ENST00000569063 DUX3Q96PT4 197 aa15.84■□□□□ 0.13
CLK3-225ENST00000569063 TSNAXQ99598 290 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms