RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	MAPK3	P27361	379 aa	Predicted RBP	12.03	□□□□□ -0.48
HERPUD1-215	ENST00000568676	HAPLN4	Q86UW8	402 aa		12.03	□□□□□ -0.48
HERPUD1-215	ENST00000568676	RIMS4	Q9H426	269 aa	Predicted RBP	12.03	□□□□□ -0.48
HERPUD1-215	ENST00000568676	ZNF355P	Q9NSJ1	428 aa		12.03	□□□□□ -0.48
HERPUD1-215	ENST00000568676	MGAT4A	Q9UM21	535 aa		12.03	□□□□□ -0.48
HERPUD1-215	ENST00000568676	GAB2	Q9UQC2	676 aa		12.03	□□□□□ -0.48
HERPUD1-215	ENST00000568676	WBP4	O75554	376 aa	Known RBP	12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	BAG2	O95816	211 aa		12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	LALBA	P00709	142 aa		12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	CD1A	P06126	327 aa		12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	PSG5	Q15238	335 aa		12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	RPL39P5	Q59GN2	51 aa		12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SVOP	Q8N4V2	548 aa		12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ZNF555	Q8NEP9	628 aa		12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	OR2K2	Q8NGT1	345 aa		12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	DERL3	Q96Q80	235 aa		12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	AGMAT	Q9BSE5	352 aa		12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	THAP7	Q9BT49	309 aa	Predicted RBP	12.02	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SHISA3	A0PJX4	238 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	NAPSA	O96009	420 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	CPE	P16870	476 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ZBTB25	P24278	435 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	FXYD3	Q14802	87 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SMN1	Q16637	294 aa	Known RBP	12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ZNF880	Q6PDB4	577 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	GLDN	Q6ZMI3	551 aa	Predicted RBP	12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	PDPN	Q86YL7	162 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	LAX1	Q8IWV1	398 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	FAM46B	Q96A09	425 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	TMEM80	Q96HE8	168 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	CLCC1	Q96S66	551 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SULT4A1	Q9BR01	284 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676	TMED9	Q9BVK6	235 aa		12.01	□□□□□ -0.49
HERPUD1-215	ENST00000568676		A0A1W2PPK0	400 aa		12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	APOA2	P02652	100 aa		12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	RPS16	P62249	146 aa	Known RBP	12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	RPS27A	P62979	156 aa	Known RBP	12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	IL34	Q6ZMJ4	242 aa		12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	C5orf24	Q7Z6I8	188 aa		12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ZNF485	Q8NCK3	441 aa		12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ABHD14B	Q96IU4	210 aa		12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	USMG5	Q96IX5	58 aa		12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	FAAP24	Q9BTP7	215 aa		12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	TMEM59	Q9BXS4	323 aa		12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	CHMP1A	Q9HD42	196 aa	Predicted RBP	12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	PEF1	Q9UBV8	284 aa	Known RBP	12	□□□□□ -0.49
HERPUD1-215	ENST00000568676	TRBV6-6	A0A0A6YYG2	114 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	AIRE	O43918	545 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	OR2A4	O95047	310 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	CNIH1	O95406	144 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SYNJ2BP	P57105	145 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	TTC23	Q5W5X9	447 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ZNF343	Q6P1L6	599 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	C6orf201	Q7Z4U5	140 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	GRPEL2	Q8TAA5	225 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	KCNG3	Q8TAE7	436 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	PTX4	Q96A99	478 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	TM2D1	Q9BX74	207 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	PEMT	Q9UBM1	199 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	CLEC2D	Q9UHP7	191 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ZNF221	Q9UK13	617 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	CEPT1	Q9Y6K0	416 aa		11.99	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ANKRD34B	A5PLL1	514 aa		11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	IGKV1-16	P04430	117 aa		11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	CEACAM6	P40199	344 aa		11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	LGALS7	P47929	136 aa		11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	RPEL1	Q2QD12	228 aa		11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ZFP41	Q8N8Y5	198 aa		11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	HIPK2	Q9H2X6	1198 aa		11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	PLEKHJ1	Q9NW61	149 aa		11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SMPD3	Q9NY59	655 aa	Predicted RBP	11.98	□□□□□ -0.49
HERPUD1-215	ENST00000568676	EFCAB10	A6NFE3	127 aa		11.97	□□□□□ -0.49
HERPUD1-215	ENST00000568676	TPPP	O94811	219 aa		11.97	□□□□□ -0.49
HERPUD1-215	ENST00000568676	BPNT1	O95861	308 aa		11.97	□□□□□ -0.49
HERPUD1-215	ENST00000568676	CSN3	P07498	182 aa		11.97	□□□□□ -0.49
HERPUD1-215	ENST00000568676	GLT8D1	Q68CQ7	371 aa		11.97	□□□□□ -0.49
HERPUD1-215	ENST00000568676	OR5T1	Q8NG75	326 aa		11.97	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SETD6	Q8TBK2	473 aa		11.97	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SNAPC3	Q92966	411 aa		11.97	□□□□□ -0.49
HERPUD1-215	ENST00000568676		A0A0B4J203	849 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SLC25A17	O43808	307 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	CEL	P19835	753 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	HTR2C	P28335	458 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	MECP2	P51608	486 aa	Known RBP	11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	HLA-DRB3	P79483	266 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	TAGLN	Q01995	201 aa	Known RBP	11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	FAM209B	Q5JX69	171 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	C1orf100	Q5SVJ3	147 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	ZNF383	Q8NA42	475 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SETD9	Q8NE22	299 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	PHYHIP	Q92561	330 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	SLC2A8	Q9NY64	477 aa		11.96	□□□□□ -0.49
HERPUD1-215	ENST00000568676	PROP1	O75360	226 aa		11.95	□□□□□ -0.5
HERPUD1-215	ENST00000568676	CD81	P60033	236 aa		11.95	□□□□□ -0.5
HERPUD1-215	ENST00000568676	ST3GAL4	Q11206	333 aa		11.95	□□□□□ -0.5
HERPUD1-215	ENST00000568676	CBX3	Q13185	183 aa		11.95	□□□□□ -0.5

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