RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SSX1Q16384 188 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 C5orf64Q2M2E5 130 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 C2orf76Q3KRA6 126 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 PLAC9Q5JTB6 97 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 HES5Q5TA89 166 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 FAM131AQ6UXB0 335 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 C18orf65Q6ZTR6 163 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 NPBQ8NG41 125 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 OR8U1Q8NH10 309 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 DPF1Q92782 380 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 PTX4Q96A99 478 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 KCTD7Q96MP8 289 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 RNF5Q99942 180 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 CMSS1Q9BQ75 279 aaKnown RBP3.75□□□□□ -1.81
CLK3-219ENST00000567805 AGMATQ9BSE5 352 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 HDHD3Q9BSH5 251 aaPredicted RBP3.75□□□□□ -1.81
CLK3-219ENST00000567805 PECRQ9BY49 303 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 OR51J1Q9H342 316 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 Q9H521 79 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 Q9N2K0 584 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 KIAA1456Q9P272 454 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 ZMAT5Q9UDW3 170 aaKnown RBP3.75□□□□□ -1.81
CLK3-219ENST00000567805 WASHC3Q9Y3C0 194 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 DNAH9Q9NYC9 4486 aa3.75□□□□□ -1.81
CLK3-219ENST00000567805 IGHV7-81A0A0B4J1V7 117 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 TRDV1A0A1B0GX56 115 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 METTL21EPA6NDL7 271 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 TRDCB7Z8K6 153 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 H0YJW9 148 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 H7C2Y5 167 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 ATP6V0E1O15342 81 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 RBBP9O75884 186 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 DIRAS3O95661 229 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 IGLV1-40P01703 118 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 GSTP1P09211 210 aaKnown RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 SCTP09683 121 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 CD3GP09693 182 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 CT45A6P0DMU7 189 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 CT45A5P0DMU8 189 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 CT45A7P0DMV0 189 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 RAB3BP20337 219 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 GADD45AP24522 165 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 PPIFP30405 207 aaKnown RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 FGF9P31371 208 aaPredicted RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 CRIP2P52943 208 aaPredicted RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 RAB25P57735 213 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 OR10A3P58181 314 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 KRTAP10-11P60412 298 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 PLA2G7Q13093 441 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 PLGLAQ15195 96 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 SRSF7Q16629 238 aaKnown RBP eCLIP3.74□□□□□ -1.81
CLK3-219ENST00000567805 DEFB136Q30KP8 78 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 RPL39P5Q59GN2 51 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 UBE2UQ5VVX9 321 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 ZNF660Q6AZW8 331 aaPredicted RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 LIN54Q6MZP7 749 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 TMEM65Q6PI78 240 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 GLDNQ6ZMI3 551 aaPredicted RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 LCNL1Q6ZST4 164 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 SPARTQ8N0X7 666 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 TCTEX1D1Q8N7M0 179 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 OR5AN1Q8NGI8 311 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 OR4A4PQ8NGN8 299 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 OR5M8Q8NGP6 311 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 OR10R2Q8NGX6 335 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 MYOZ3Q8TDC0 251 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 C4orf3Q8WVX3 66 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 FCGR1BQ92637 280 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 RAB3CQ96E17 227 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 RBMXL1Q96E39 390 aaKnown RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 RAX2Q96IS3 184 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 ABHD14BQ96IU4 210 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 RITA1Q96K30 269 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 UBE2E2Q96LR5 201 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 DUX3Q96PT4 197 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 CENPOQ9BU64 300 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 YTHDF1Q9BYJ9 559 aaKnown RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 TOLLIPQ9H0E2 274 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 PARP12Q9H0J9 701 aaKnown RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 C11orf54Q9H0W9 315 aaPredicted RBP3.74□□□□□ -1.81
CLK3-219ENST00000567805 PARP11Q9NR21 331 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 RDH8Q9NYR8 311 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 OR1A1Q9P1Q5 309 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 ZNF221Q9UK13 617 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 NOTCH3Q9UM47 2321 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 KCNK7Q9Y2U2 307 aa3.74□□□□□ -1.81
CLK3-219ENST00000567805 TRBV6-7A0A0A0MS04 114 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 TRAV41A0A0B4J266 112 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 IGKV1-6A0A0C4DH72 117 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 WI2-2373I1.2A0A1W2PRP0 233 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 SHISA3A0PJX4 238 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 NOTOA8MTQ0 251 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 G3V318 75 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 K7EIL1 84 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 RAB27BO00194 218 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 MFNGO00587 321 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 RRHO14718 337 aa3.73□□□□□ -1.81
CLK3-219ENST00000567805 BET1O15155 118 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms