RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SLC36A1Q7Z2H8 476 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 VN1R4Q7Z5H5 301 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM144Q7Z5S9 345 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF429Q86V71 674 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 SMIM20Q8N5G0 67 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC25A29Q8N8R3 303 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ZDHHC22Q8N966 263 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 OR4K5Q8NGD3 323 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 OR5H2Q8NGV7 314 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 LINC01006Q8NI28 216 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 FAM57AQ8TBR7 257 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 SLC25A44Q96H78 314 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ACY3Q96HD9 319 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF414Q96IQ9 312 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ANKRD36BP1Q96IX9 119 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 OR7D2Q96RA2 312 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF717Q9BY31 904 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 EIF5A2Q9GZV4 153 aaKnown RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 OR51I2Q9H344 312 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF430Q9H8G1 570 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 DDX19AQ9NUU7 478 aaKnown RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 C14orf105Q9NVL8 296 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 CMTM6Q9NX76 183 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 LINC00527Q9UJ94 153 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 UFC1Q9Y3C8 167 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 MKI67P46013 3256 aaKnown RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 MUC6Q6W4X9 2439 aa2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 KMT2BQ9UMN6 2715 aaPredicted RBP2.34□□□□□ -2.03
HERPUD1-211ENST00000566550 MIA3Q5JRA6 1907 aa2.34□□□□□ -2.04
HERPUD1-211ENST00000566550 ROCK1Q13464 1354 aa2.34□□□□□ -2.04
HERPUD1-211ENST00000566550 EIF3AQ14152 1382 aaKnown RBP2.34□□□□□ -2.04
HERPUD1-211ENST00000566550 OVOS2A0A0G2JMS6 1433 aa2.34□□□□□ -2.04
HERPUD1-211ENST00000566550 OVOS2A0A0J9YW53 1432 aa2.34□□□□□ -2.04
HERPUD1-211ENST00000566550 NOS1P29475 1434 aa2.34□□□□□ -2.04
HERPUD1-211ENST00000566550 OVOS2Q6IE36 1432 aa2.34□□□□□ -2.04
HERPUD1-211ENST00000566550 SPATA31E1Q6ZUB1 1445 aa2.34□□□□□ -2.04
HERPUD1-211ENST00000566550 EYSQ5T1H1 3165 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNFX1Q9P2E3 1918 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 TMED7-TICAM2A0A0A6YYA0 188 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 TRAV8-1A0A0A6YYK1 113 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 IGHV5-10-1A0A0J9YXX1 117 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 FAM168BA1KXE4 195 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 KLLNB2CW77 178 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 D6RAR5 112 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 H0YJW9 148 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 IFNA1P01562 189 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 IGKV3-20P01619 116 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 APCSP02743 223 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 SERPINA7P05543 415 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF688P0C7X2 276 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 IGHV1-8P0DP01 117 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 NELFEP18615 380 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 DDTP30046 118 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 TGFBR1P36897 503 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 MARCKSL1P49006 195 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 RIPPLY3P57055 190 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 HERVK_113P63121 156 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 IGLV3-21P80748 117 aaPredicted RBP2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 FABP5Q01469 135 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 ATP5G2Q06055 141 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 TNFRSF9Q07011 255 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 FAM201AQ5SY85 155 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 C1orf194Q5T5A4 169 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF774Q6NX45 483 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 EBLN2Q6P2I7 272 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 SLC16A13Q7RTY0 426 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 DPPA2Q7Z7J5 298 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 LINC01551Q86U37 167 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF567Q8N184 647 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 UBL4BQ8N7F7 174 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF676Q8N7Q3 588 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 YIPF7Q8N8F6 280 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 OR10G2Q8NGC3 310 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 DYDC1Q8WWB3 177 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 KLK6Q92876 244 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 FAM104AQ969W3 186 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 ZHX1-C8orf76Q96EF9 292 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 SFRP2Q96HF1 295 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 SLC35G5Q96KT7 338 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 OR2A5Q96R48 311 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 TBX5Q99593 518 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 RNASE7Q9H1E1 156 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 PLEKHF2Q9H8W4 249 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 NANOGQ9H9S0 305 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 C8orf17Q9NRJ1 99 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 UQCC1Q9NVA1 299 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 TAS2R1Q9NYW7 299 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 TAC3Q9UHF0 121 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF222Q9UK12 451 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 PXMP4Q9Y6I8 212 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 GPR179Q6PRD1 2367 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 ZDBF2Q9HCK1 2354 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 TTC28Q96AY4 2481 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 TMEM2Q9UHN6 1383 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 COL14A1Q05707 1796 aaKnown RBP2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 SBF2Q86WG5 1849 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 CCDC18Q5T9S5 1454 aa2.33□□□□□ -2.04
HERPUD1-211ENST00000566550 PAPPAQ13219 1627 aa2.32□□□□□ -2.04
HERPUD1-211ENST00000566550 LRRIQ1Q96JM4 1722 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms