RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 TAS2R3Q9NYW6 316 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 LAMP3Q9UQV4 416 aa13.91□□□□□ -0.18
RAB40C-210ENST00000566290 TRAV39A0A0B4J263 110 aa13.9□□□□□ -0.18
RAB40C-210ENST00000566290 ZNF729A6NN14 1252 aaPredicted RBP13.9□□□□□ -0.18
RAB40C-210ENST00000566290 TMEM178BH3BS89 294 aa13.9□□□□□ -0.18
RAB40C-210ENST00000566290 TNFRSF13BO14836 293 aaPredicted RBP13.9□□□□□ -0.18
RAB40C-210ENST00000566290 PITX3O75364 302 aa13.9□□□□□ -0.18
RAB40C-210ENST00000566290 ATG12O94817 140 aa13.9□□□□□ -0.18
RAB40C-210ENST00000566290 SERPINE2P07093 398 aa13.9□□□□□ -0.18
RAB40C-210ENST00000566290 THOC7Q6I9Y2 204 aaKnown RBP13.9□□□□□ -0.18
RAB40C-210ENST00000566290 HSD17B10Q99714 261 aaKnown RBP13.9□□□□□ -0.18
RAB40C-210ENST00000566290 AGMATQ9BSE5 352 aa13.9□□□□□ -0.18
RAB40C-210ENST00000566290 OR2S2Q9NQN1 319 aa13.9□□□□□ -0.18
RAB40C-210ENST00000566290 GSKIPQ9P0R6 139 aa13.9□□□□□ -0.18
RAB40C-210ENST00000566290 CADP27708 2225 aa13.9□□□□□ -0.18
RAB40C-210ENST00000566290 A0A1B0GW55 424 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 FAM90A26D6RGX4 464 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 RBFOX2O43251 390 aaKnown RBP eCLIP13.89□□□□□ -0.192e-11■■□□□ 12.3
RAB40C-210ENST00000566290 OR8U9P0C7N5 309 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 DUX4L2P0CJ85 424 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 DUX4L3P0CJ86 424 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 DUX4L4P0CJ87 422 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 DUX4L5P0CJ88 424 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 DUX4L6P0CJ89 424 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 DUX4L7P0CJ90 424 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 HKR1P10072 659 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 TPT1P13693 172 aaKnown RBP13.89□□□□□ -0.19
RAB40C-210ENST00000566290 SSTR5P35346 364 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 RAB7AP51149 207 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 ARHGDIBP52566 201 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 LOXL3P58215 753 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 S100A10P60903 97 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 ID3Q02535 119 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 ZNF672Q499Z4 452 aaPredicted RBP13.89□□□□□ -0.19
RAB40C-210ENST00000566290 SLC7A5P1Q8MH63 180 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 OR8U1Q8NH10 309 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 CD300LFQ8TDQ1 290 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 DYNLRB1Q9NP97 96 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 TMEM106BQ9NUM4 274 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 CALYQ9NYX4 217 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 DUX4Q9UBX2 424 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 RBM7Q9Y580 266 aaKnown RBP13.89□□□□□ -0.19
RAB40C-210ENST00000566290 LINC00312Q9Y6C7 94 aa13.89□□□□□ -0.19
RAB40C-210ENST00000566290 PPIAL4EA0A075B759 164 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 TRGV10A0A0A0MS01 117 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 KBTBD11-OT1A0A1B0GTJ5 212 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 PPIAL4DF5H284 164 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 CYB5R3P00387 301 aaPredicted RBP13.88□□□□□ -0.19
RAB40C-210ENST00000566290 PPIAL4FP0DN26 164 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 PVALBP20472 110 aaPredicted RBP13.88□□□□□ -0.19
RAB40C-210ENST00000566290 NKX2-1P43699 371 aaPredicted RBP13.88□□□□□ -0.19
RAB40C-210ENST00000566290 CCL8P80075 99 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 MRPS11P82912 194 aaKnown RBP13.88□□□□□ -0.19
RAB40C-210ENST00000566290 MORN2Q502X0 79 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 KRTAP1-3Q8IUG1 177 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 OR8H3Q8N146 312 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 PRR18Q8N4B5 295 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 ZNRF1Q8ND25 227 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 PARP12Q9H0J9 701 aaKnown RBP13.88□□□□□ -0.19
RAB40C-210ENST00000566290 OR2D2Q9H210 308 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 CYTL1Q9NRR1 136 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 CLN8Q9UBY8 286 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 PPIAL4AQ9Y536 164 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 PLCE1Q9P212 2302 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 MXRA5Q9NR99 2828 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 RAI1Q7Z5J4 1906 aaPredicted RBP13.88□□□□□ -0.19
RAB40C-210ENST00000566290 HIVEP2P31629 2446 aa13.88□□□□□ -0.19
RAB40C-210ENST00000566290 ROS1P08922 2347 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 IGHV3OR15-7A0A075B7D8 119 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 hADV38S2A0JD32 116 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 MSGN1A6NI15 193 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 F5H0A9 414 aaPredicted RBP13.87□□□□□ -0.19
RAB40C-210ENST00000566290 GPR137BO60478 399 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 NMBP08949 121 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 P0C879 139 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 RRASP10301 218 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 RPL12P30050 165 aaKnown RBP13.87□□□□□ -0.19
RAB40C-210ENST00000566290 HOXA4Q00056 320 aaPredicted RBP13.87□□□□□ -0.19
RAB40C-210ENST00000566290 EDDM3AQ14507 147 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 GNMTQ14749 295 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 DEFB113Q30KQ7 82 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 ZNF585BQ52M93 769 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 BAP18Q8IXM2 172 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 DMBX1Q8NFW5 382 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 OR52L2PQ8NGH6 319 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 NEUROG1Q92886 237 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 ZNF471Q9BX82 626 aaPredicted RBP13.87□□□□□ -0.19
RAB40C-210ENST00000566290 UBTD1Q9HAC8 227 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 KCNS2Q9ULS6 477 aa13.87□□□□□ -0.19
RAB40C-210ENST00000566290 RCL1Q9Y2P8 373 aaKnown RBP13.87□□□□□ -0.19
RAB40C-210ENST00000566290 DYSFO75923 2080 aa13.86□□□□□ -0.19
RAB40C-210ENST00000566290 FAM90A9PA6NNJ1 464 aa13.86□□□□□ -0.19
RAB40C-210ENST00000566290 IGKV1-39P01597 117 aa13.86□□□□□ -0.19
RAB40C-210ENST00000566290 IGKV1D-39P04432 117 aa13.86□□□□□ -0.19
RAB40C-210ENST00000566290 PPP1CCP36873 323 aaKnown RBP13.86□□□□□ -0.19
RAB40C-210ENST00000566290 C17orf58Q2M2W7 97 aa13.86□□□□□ -0.19
RAB40C-210ENST00000566290 EIF5AL1Q6IS14 154 aaKnown RBP13.86□□□□□ -0.19
RAB40C-210ENST00000566290 C8orf31Q8N9H6 132 aa13.86□□□□□ -0.19
RAB40C-210ENST00000566290 BOLLQ8N9W6 283 aaKnown RBP13.86□□□□□ -0.19
RAB40C-210ENST00000566290 OR51H1Q8NH63 302 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms