RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 KNCNA6PVL3 124 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 B4DEV8 164 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 GOLGA8KD6RF30 607 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 F5H768 121 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 GOLGA8MH3BSY2 632 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 TP53I11O14683 189 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 SLC16A4O15374 487 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 ZW10O43264 779 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 EEF1E1O43324 174 aaKnown RBP0.94□□□□□ -2.26
CHD9-211ENST00000564600 STK16O75716 305 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 ARL6IP5O75915 188 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 CTSGP08311 255 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 OCM2P0CE71 109 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 PET100P0DJ07 73 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 NQO1P15559 274 aaKnown RBP0.94□□□□□ -2.26
CHD9-211ENST00000564600 BLVRBP30043 206 aaPredicted RBP0.94□□□□□ -2.26
CHD9-211ENST00000564600 PSMD7P51665 324 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 CLDN12P56749 244 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 RBM11P57052 281 aaKnown RBP0.94□□□□□ -2.26
CHD9-211ENST00000564600 GABARAPL2P60520 117 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 SLC35A2P78381 396 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 LGALS9BQ3B8N2 356 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 KRTAP21-3Q3LHN1 58 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 MESTQ5EB52 335 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 LGALS9CQ6DKI2 356 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 ZNF322Q6U7Q0 402 aaPredicted RBP0.94□□□□□ -2.26
CHD9-211ENST00000564600 FUNDC1Q8IVP5 155 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 DNAAF3Q8N9W5 541 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 PHOSPHO2Q8TCD6 241 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 HAVCR2Q8TDQ0 301 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 RNF133Q8WVZ7 376 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 OPTNQ96CV9 577 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 ARL5BQ96KC2 179 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 DNAJC30Q96LL9 226 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 KCTD7Q96MP8 289 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 MED18Q9BUE0 208 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 KCNIP2Q9NS61 270 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 ZNHIT6Q9NWK9 470 aaKnown RBP0.94□□□□□ -2.26
CHD9-211ENST00000564600 NKIRAS1Q9NYS0 192 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 USE1Q9NZ43 259 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 PRO2289Q9P1D8 64 aa0.94□□□□□ -2.26
CHD9-211ENST00000564600 RP1L1Q8IWN7 2480 aaPredicted RBP0.94□□□□□ -2.26
CHD9-211ENST00000564600 CRB1P82279 1406 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 C5orf49A4QMS7 147 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 H3BPC8 53 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 COCHO43405 550 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 SSNA1O43805 119 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 APOMO95445 188 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 OR4A8P0C604 315 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 RD3LP0DJH9 198 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 OR13C7P0DN81 318 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 MYL12AP19105 171 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 CD40LGP29965 261 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 IFNGR2P38484 337 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 CA7P43166 264 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 DAPP51397 102 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 TAS2R45P59539 299 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 BTN3A2P78410 334 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 PSG4Q00888 419 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 BSPH1Q075Z2 132 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 MLLT11Q13015 90 aaPredicted RBP0.93□□□□□ -2.26
CHD9-211ENST00000564600 SS18Q15532 418 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 UAP1Q16222 522 aaPredicted RBP0.93□□□□□ -2.26
CHD9-211ENST00000564600 N4BP2L1Q5TBK1 243 aaPredicted RBP0.93□□□□□ -2.26
CHD9-211ENST00000564600 NOXRED1Q6NXP6 359 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 XKRXQ6PP77 449 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 LRRN1Q6UXK5 716 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 C1orf158Q8N1D5 194 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 RIBC1Q8N443 379 aaPredicted RBP0.93□□□□□ -2.26
CHD9-211ENST00000564600 GPR32P1Q8NGA4 272 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 CLDND2Q8NHS1 167 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 PIGXQ8TBF5 258 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 Q8WTZ3 238 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 MROQ9BYG7 248 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 POTEKPQ9BYX7 375 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 TMEM222Q9H0R3 208 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 TUBA4BQ9H853 241 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 TXNL4BQ9NX01 149 aaKnown RBP0.93□□□□□ -2.26
CHD9-211ENST00000564600 EMC3Q9P0I2 261 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 POLR1DQ9Y2S0 133 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 ZNF337Q9Y3M9 751 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 ZNF638Q14966 1978 aaKnown RBP0.93□□□□□ -2.26
CHD9-211ENST00000564600 ABCC12Q96J65 1359 aa0.93□□□□□ -2.26
CHD9-211ENST00000564600 CACNA1SQ13698 1873 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 SLX4Q8IY92 1834 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 MDC1Q14676 2089 aaKnown RBP0.92□□□□□ -2.26
CHD9-211ENST00000564600 IGHV3-73A0A0B4J1V6 119 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 OR6C6A6NF89 314 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 SDHAF1A6NFY7 115 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 DISC1C4P0D8 188 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 UBFD1O14562 309 aaKnown RBP0.92□□□□□ -2.26
CHD9-211ENST00000564600 LY6HO94772 140 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 PSMG1O95456 288 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 APOEP02649 317 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 IL6P05231 212 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 TPM3P06753 285 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 IL3P08700 152 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 COX5BP10606 129 aa0.92□□□□□ -2.26
CHD9-211ENST00000564600 ZNF7P17097 686 aaPredicted RBP0.92□□□□□ -2.26
CHD9-211ENST00000564600 CRHBPP24387 322 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms