RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 C1orf229Q6ZS94 237 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-208ENST00000564247 PDZD9Q8IXQ8 264 aa13.78□□□□□ -0.2
CMTM3-208ENST00000564247 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-208ENST00000564247 TMEM158Q8WZ71 300 aa13.78□□□□□ -0.2
CMTM3-208ENST00000564247 GAB2Q9UQC2 676 aa13.78□□□□□ -0.2
CMTM3-208ENST00000564247 TRAV6A0A075B6T7 132 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 RNF212BA8MTL3 300 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 AVPP01185 164 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 IGLV1-47P01700 117 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 HTR1DP28221 377 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 CEACAM3P40198 252 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 BAMBIQ13145 260 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 HLA-DRB5Q30154 266 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 ZNF626Q68DY1 528 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 HCP5Q6MZN7 132 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 C11orf88Q6PI97 169 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 CCBE1Q6UXH8 406 aaPredicted RBP13.77□□□□□ -0.21
CMTM3-208ENST00000564247 TMED4Q7Z7H5 227 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 CCDC71LQ8N9Z2 235 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 SPATA3Q8NHX4 192 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 MRGPRFQ96AM1 343 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 C20orf85Q9H1P6 137 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 IFI27L2Q9H2X8 130 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 VSIG4Q9Y279 399 aa13.77□□□□□ -0.21
CMTM3-208ENST00000564247 CENPVL3A0A0U1RRI6 287 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 A0A1W2PRD5 423 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 A0A1W2PRF3 423 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 A0A1W2PRM7 423 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 LEUTXA8MZ59 168 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 BUB1B-PAK6H3BSN5 160 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 ARPC1BO15143 372 aaKnown RBP13.76□□□□□ -0.21
CMTM3-208ENST00000564247 TAS2R31P59538 309 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 SCGB2A2Q13296 93 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 MIDNQ504T8 468 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 CENPSQ8N2Z9 138 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 DRAM1Q8N682 238 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 BVESQ8NE79 360 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 CHPT1Q8WUD6 406 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 NUDT15Q9NV35 164 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 DPM3Q9P2X0 92 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 FLVCR2Q9UPI3 526 aa13.76□□□□□ -0.21
CMTM3-208ENST00000564247 TBL2Q9Y4P3 447 aaKnown RBP13.76□□□□□ -0.21
CMTM3-208ENST00000564247 IGHV1-69DA0A0B4J2H0 117 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 ODF3BA8MYP8 253 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 INMT-MINDY4F8WBC2 141 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 DHFRP00374 187 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 IGHV1-69P01742 117 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 SPNP16150 400 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 AKR1C4P17516 323 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 PI3P19957 117 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 EPHA1P21709 976 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 PIGPP57054 158 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 OXA1LQ15070 435 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 PHLDA2Q53GA4 152 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 MINOS1Q5TGZ0 78 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 ZNF818PQ6ZRF7 136 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 LDLRAD3Q86YD5 345 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 NANPQ8TBE9 248 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 RTBDNQ9BSG5 229 aaPredicted RBP13.75□□□□□ -0.21
CMTM3-208ENST00000564247 C5orf66Q9H5L9 145 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 SDHAF2Q9NX18 166 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 ZNRD1Q9P1U0 126 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 MINOS1-NBL1R4GNA1 71 aa13.75□□□□□ -0.21
CMTM3-208ENST00000564247 SAA2-SAA4A0A096LPE2 208 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 TEX13DA0A0J9YY54 714 aaPredicted RBP13.74□□□□□ -0.21
CMTM3-208ENST00000564247 M0R1X1 148 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 NPFFO15130 113 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 TCF21O43680 179 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 GAPDHP04406 335 aaKnown RBP13.74□□□□□ -0.21
CMTM3-208ENST00000564247 SAA2P0DJI9 122 aaPredicted RBP13.74□□□□□ -0.21
CMTM3-208ENST00000564247 RAG2P55895 527 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 BPIFB3P59826 476 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 RND3P61587 244 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 FAM71F2Q6NXP2 309 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 ZNF66Q6ZN08 573 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 ODF3L1Q8IXM7 274 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 OR4P4Q8NGL7 312 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 RPEQ96AT9 228 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 HSD17B10Q99714 261 aaKnown RBP13.74□□□□□ -0.21
CMTM3-208ENST00000564247 MARVELD1Q9BSK0 173 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 ALX4Q9H161 411 aaPredicted RBP13.74□□□□□ -0.21
CMTM3-208ENST00000564247 SLC2A9Q9NRM0 540 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 KCNIP3Q9Y2W7 256 aa13.74□□□□□ -0.21
CMTM3-208ENST00000564247 TRAV40A0A0B4J280 105 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 TXNL1O43396 289 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 TNFSF12O43508 249 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 PEX14O75381 377 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 PGLYRP1O75594 196 aaPredicted RBP13.73□□□□□ -0.21
CMTM3-208ENST00000564247 IGLV2-14P01704 120 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 ZNF137PP52743 207 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 UBE2MP61081 183 aaKnown RBP13.73□□□□□ -0.21
CMTM3-208ENST00000564247 CATR1Q13166 79 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 KRTAP24-1Q3LI83 254 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 RPL39P5Q59GN2 51 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 TMEM128Q5BJH2 165 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 ZNF833PQ6ZTB9 187 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 SLC25A42Q86VD7 318 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 TGIF2LXQ8IUE1 241 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 SGPP2Q8IWX5 399 aa13.73□□□□□ -0.21
CMTM3-208ENST00000564247 ADAD2Q8NCV1 583 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms