RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 KCTD7Q96MP8 289 aa11.65□□□□□ -0.54
SNX29-203ENST00000564111 TXNL4BQ9NX01 149 aaKnown RBP11.65□□□□□ -0.54
SNX29-203ENST00000564111 ETV7Q9Y603 341 aa11.65□□□□□ -0.54
SNX29-203ENST00000564111 H0YJW9 148 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 H7C2Y5 167 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 RRHO14718 337 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 ARPC1BO15143 372 aaKnown RBP11.64□□□□□ -0.55
SNX29-203ENST00000564111 GSTP1P09211 210 aaKnown RBP11.64□□□□□ -0.55
SNX29-203ENST00000564111 ARFRP1Q13795 201 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 PLGLAQ15195 96 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 C10orf99Q6UWK7 81 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 CROCCP3Q8IVE0 287 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 HDHD3Q9BSH5 251 aaPredicted RBP11.64□□□□□ -0.55
SNX29-203ENST00000564111 A0A0A6YYH2 397 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 A6NJ64 397 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 CT45A6P0DMU7 189 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 CT45A5P0DMU8 189 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 CT45A7P0DMV0 189 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 ETV3LQ6ZN32 361 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 MRPL41Q8IXM3 137 aaKnown RBP11.64□□□□□ -0.55
SNX29-203ENST00000564111 OR5M8Q8NGP6 311 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 HSPB9Q9BQS6 159 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 GINS4Q9BRT9 223 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 ATG5Q9H1Y0 275 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 DCSTAMPQ9H295 470 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 RDH8Q9NYR8 311 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 OR1A1Q9P1Q5 309 aa11.64□□□□□ -0.55
SNX29-203ENST00000564111 TRAV41A0A0B4J266 112 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 SLC22A5O76082 557 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 SCTP09683 121 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 IGLL1P15814 213 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 OR10A3P58181 314 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 RUNX1Q01196 453 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 OXLD1Q5BKU9 147 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 HIST2H2BDQ6DRA6 164 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 Q6ZPA2 131 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 P2RX4Q99571 388 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 PARP11Q9NR21 331 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 TRBV6-7A0A0A0MS04 114 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 RAB27BO00194 218 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 PSMB8P28062 276 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 CD40LGP29965 261 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 RPL39P5Q59GN2 51 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 FOXB2Q5VYV0 432 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 MRAPQ8TCY5 172 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 MYOZ3Q8TDC0 251 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 UBE2E2Q96LR5 201 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 VSIG4Q9Y279 399 aa11.63□□□□□ -0.55
SNX29-203ENST00000564111 CCL24O00175 119 aa11.62□□□□□ -0.55
SNX29-203ENST00000564111 LGALS7P47929 136 aa11.62□□□□□ -0.55
SNX29-203ENST00000564111 RTL8BQ17RB0 113 aa11.62□□□□□ -0.55
SNX29-203ENST00000564111 C8orf86Q6ZUL3 223 aa11.62□□□□□ -0.55
SNX29-203ENST00000564111 AURKAIP1Q9NWT8 199 aaPredicted RBP11.62□□□□□ -0.55
SNX29-203ENST00000564111 LINC00527Q9UJ94 153 aa11.62□□□□□ -0.55
SNX29-203ENST00000564111 FOXA2Q9Y261 457 aaPredicted RBP11.62□□□□□ -0.55
SNX29-203ENST00000564111 IGHV7-81A0A0B4J1V7 117 aa11.62□□□□□ -0.55
SNX29-203ENST00000564111 OR8U8P0C7N1 319 aa11.62□□□□□ -0.55
SNX29-203ENST00000564111 EGFEM1PQ0D2K5 195 aa11.62□□□□□ -0.55
SNX29-203ENST00000564111 ABHD14BQ96IU4 210 aa11.62□□□□□ -0.55
SNX29-203ENST00000564111 TMEM68Q96MH6 324 aa11.62□□□□□ -0.55
SNX29-203ENST00000564111 M0R1X1 148 aa11.61□□□□□ -0.55
SNX29-203ENST00000564111 ATP6V0E1O15342 81 aa11.61□□□□□ -0.55
SNX29-203ENST00000564111 CREBL2O60519 120 aaPredicted RBP11.61□□□□□ -0.55
SNX29-203ENST00000564111 RPLP1P05386 114 aaKnown RBP11.61□□□□□ -0.55
SNX29-203ENST00000564111 GNB3P16520 340 aa11.61□□□□□ -0.55
SNX29-203ENST00000564111 SFXN4Q6P4A7 337 aa11.61□□□□□ -0.55
SNX29-203ENST00000564111 FLYWCH2Q96CP2 140 aaKnown RBP11.61□□□□□ -0.55
SNX29-203ENST00000564111 SLC35D1Q9NTN3 355 aa11.61□□□□□ -0.55
SNX29-203ENST00000564111 RRP15Q9Y3B9 282 aaKnown RBP11.61□□□□□ -0.55
SNX29-203ENST00000564111 RBM7Q9Y580 266 aaKnown RBP11.61□□□□□ -0.55
SNX29-203ENST00000564111 SHISA3A0PJX4 238 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 H3BUA1 57 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 BET1O15155 118 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 RAMP3O60896 148 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 IGLV1-40P01703 118 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 PPIFP30405 207 aaKnown RBP11.6□□□□□ -0.55
SNX29-203ENST00000564111 C9orf66Q5T8R8 295 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 HACD4Q5VWC8 232 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 MINDY2Q8NBR6 621 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 OR2D2Q9H210 308 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 KCNK7Q9Y2U2 307 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 VWFP04275 2813 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 IGKV1-6A0A0C4DH72 117 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 LINC01548A6NM66 108 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 SLC2A2P11168 524 aaPredicted RBP11.6□□□□□ -0.55
SNX29-203ENST00000564111 GNG2P59768 71 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 RPS16P62249 146 aaKnown RBP11.6□□□□□ -0.55
SNX29-203ENST00000564111 MOGAT2Q3SYC2 334 aa11.6□□□□□ -0.55
SNX29-203ENST00000564111 METTL1Q9UBP6 276 aaKnown RBP11.6□□□□□ -0.55
SNX29-203ENST00000564111 PSG5Q15238 335 aa11.59□□□□□ -0.55
SNX29-203ENST00000564111 CDNFQ49AH0 187 aa11.59□□□□□ -0.55
SNX29-203ENST00000564111 ZNF562Q6V9R5 426 aa11.59□□□□□ -0.55
SNX29-203ENST00000564111 H1FOOQ8IZA3 346 aaPredicted RBP11.59□□□□□ -0.55
SNX29-203ENST00000564111 ABHD5Q8WTS1 349 aa11.59□□□□□ -0.55
SNX29-203ENST00000564111 RAX2Q96IS3 184 aa11.59□□□□□ -0.55
SNX29-203ENST00000564111 SLA2Q9H6Q3 261 aa11.59□□□□□ -0.55
SNX29-203ENST00000564111 DAPK2Q9UIK4 370 aa11.59□□□□□ -0.55
SNX29-203ENST00000564111 A0A075B6Q4 140 aa11.59□□□□□ -0.55
SNX29-203ENST00000564111 A0A087WXM4 84 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms