RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 IGLV1-47P01700 117 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 HTR1DP28221 377 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 KIR2DS2P43631 304 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 THBS3P49746 956 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 UBE2E1P51965 193 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 ARHGDIBP52566 201 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 ZNF137PP52743 207 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 CBX3Q13185 183 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 DHRS2Q13268 280 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 MINOS1Q5TGZ0 78 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 GPR157Q5UAW9 335 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 ZNF833PQ6ZTB9 187 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 TCTEX1D1Q8N7M0 179 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 OR4P4Q8NGL7 312 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 OR51H1Q8NH63 302 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 ZNF431Q8TF32 576 aaPredicted RBP10.45□□□□□ -0.74
CLK3-214ENST00000564096 TCTEX1D2Q8WW35 142 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 TMEM230Q96A57 120 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 RPEQ96AT9 228 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 GALNT14Q96FL9 552 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 TBX15Q96SF7 602 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 PHB2Q99623 299 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 PRELID3BQ9Y3B1 194 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 TBL2Q9Y4P3 447 aaKnown RBP10.45□□□□□ -0.74
CLK3-214ENST00000564096 ALG5Q9Y673 324 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 MINOS1-NBL1R4GNA1 71 aa10.45□□□□□ -0.74
CLK3-214ENST00000564096 C3orf85A0A1B0GTC6 90 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 LEUTXA8MZ59 168 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 SMAD7O15105 426 aaKnown RBP10.44□□□□□ -0.74
CLK3-214ENST00000564096 SSNA1O43805 119 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 PGLYRP1O75594 196 aaPredicted RBP10.44□□□□□ -0.74
CLK3-214ENST00000564096 IGLV2-14P01704 120 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 APOA2P02652 100 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 VSIG10L2P0DP72 767 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 EPHA1P21709 976 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 F2RP25116 425 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 DHODHQ02127 395 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 KLRD1Q13241 179 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 RPL39P5Q59GN2 51 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 CCDC144NLQ6NUI1 221 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 LDLRAD3Q86YD5 345 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 TGIF2LXQ8IUE1 241 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 CD300LFQ8TDQ1 290 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 CASTOR1Q8WTX7 329 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 CAPSLQ8WWF8 208 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 LHX4Q969G2 390 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 SEC22CQ9BRL7 303 aa10.44□□□□□ -0.74
CLK3-214ENST00000564096 TRAV40A0A0B4J280 105 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 C9orf170A2RU37 121 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 OOSP1A8MZH6 123 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 RNASEK-C17orf49H0YIS7 233 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 BUB1B-PAK6H3BSN5 160 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 DUS4LO95620 317 aaKnown RBP10.43□□□□□ -0.74
CLK3-214ENST00000564096 SERPINE2P07093 398 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 OR5AC1P0C628 307 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 RAB13P51153 203 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 TAGLNQ01995 201 aaKnown RBP10.43□□□□□ -0.74
CLK3-214ENST00000564096 SLC9A3R2Q15599 337 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 RTL8BQ17RB0 113 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 MIDNQ504T8 468 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 UTF1Q5T230 341 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 ODF3L1Q8IXM7 274 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 OR51J1Q9H342 316 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 FAM212BQ9NTI7 297 aaPredicted RBP10.43□□□□□ -0.74
CLK3-214ENST00000564096 DPM3Q9P2X0 92 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 TACC2O95359 2948 aa10.43□□□□□ -0.74
CLK3-214ENST00000564096 hCG_2014768A0A024R1R8 64 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 A0A0A6YYJ9 748 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 A0A0B4J293 547 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 A0A0B4J2A0 478 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 ATG12O94817 140 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 GAPDHP04406 335 aaKnown RBP10.42□□□□□ -0.74
CLK3-214ENST00000564096 RRASP10301 218 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 RPA2P15927 270 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 DUTP33316 252 aaKnown RBP10.42□□□□□ -0.74
CLK3-214ENST00000564096 DLX1P56177 255 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 PRB3Q04118 309 aaPredicted RBP10.42□□□□□ -0.74
CLK3-214ENST00000564096 ZNF816Q0VGE8 651 aaPredicted RBP10.42□□□□□ -0.74
CLK3-214ENST00000564096 HCP5Q6MZN7 132 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 PDZD9Q8IXQ8 264 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 LGI3Q8N145 548 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 OR52B4Q8NGK2 314 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 OR4S2Q8NH73 311 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 MITD1Q8WV92 249 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 C5orf30Q96GV9 206 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 TMEM222Q9H0R3 208 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 MED28Q9H204 178 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 ZNRD1Q9P1U0 126 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 SHPKQ9UHJ6 478 aa10.42□□□□□ -0.74
CLK3-214ENST00000564096 CREBBPQ92793 2442 aa10.41□□□□□ -0.74
CLK3-214ENST00000564096 IGHV1-69DA0A0B4J2H0 117 aa10.41□□□□□ -0.74
CLK3-214ENST00000564096 DUXBA0A1W2PPF3 345 aa10.41□□□□□ -0.74
CLK3-214ENST00000564096 NPFFO15130 113 aa10.41□□□□□ -0.74
CLK3-214ENST00000564096 RBFOX2O43251 390 aaKnown RBP eCLIP10.41□□□□□ -0.74
CLK3-214ENST00000564096 IGHV1-69P01742 117 aa10.41□□□□□ -0.74
CLK3-214ENST00000564096 UCP1P25874 307 aa10.41□□□□□ -0.74
CLK3-214ENST00000564096 BPIFB3P59826 476 aa10.41□□□□□ -0.74
CLK3-214ENST00000564096 SUPT4H1P63272 117 aaKnown RBP10.41□□□□□ -0.74
CLK3-214ENST00000564096 EIF4EBP1Q13541 118 aaPredicted RBP10.41□□□□□ -0.74
CLK3-214ENST00000564096 KIAA2026Q5HYC2 2103 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms