RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 GLP1RP43220 463 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 MAP2K4P45985 399 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 ZNF85Q03923 595 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 ELP2Q6IA86 826 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 FDX2Q6P4F2 183 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 BTNL8Q6UX41 500 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 LINC00311Q8N616 119 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 TCEANCQ8N8B7 351 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 OR5D18Q8NGL1 313 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 RFESDQ8TAC1 157 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 THRSPQ92748 146 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 SPSB1Q96BD6 273 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 OPALINQ96PE5 141 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 TBX5Q99593 518 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 FAM103A1Q9BTL3 118 aaKnown RBP7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 RHOFQ9HBH0 211 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 FRRS1LQ9P0K9 344 aa7.38□□□□□ -1.23
HDGFL3-204ENST00000563790 TMEM213A2RRL7 107 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 C15orf61A6NNL5 157 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 TXNL1O43396 289 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 NDUFA3O95167 84 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 C1QBP02746 253 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 KRT8P05787 483 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 UBCP0CG48 685 aaKnown RBP7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 DNAH10OSP0CZ25 163 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 PRKACBP22694 351 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 ZNF137PP52743 207 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 ACTR3P61158 418 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 USF2Q15853 346 aaPredicted RBP7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 TMEM88Q6PEY1 159 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 C8orf31Q8N9H6 132 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 UXS1Q8NBZ7 420 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 ZNF439Q8NDP4 499 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 SETD9Q8NE22 299 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 NPBQ8NG41 125 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 OR10A7Q8NGE5 316 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 OR2G2Q8NGZ5 317 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 FGGYQ96C11 551 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 USMG5Q96IX5 58 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 RITA1Q96K30 269 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 IL4I1Q96RQ9 567 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 FAM107BQ9H098 131 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 Q9H8V8 135 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 ARGLU1Q9NWB6 273 aaPredicted RBP7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 DHDHQ9UQ10 334 aa7.37□□□□□ -1.23
HDGFL3-204ENST00000563790 A0A087WTM6 91 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 MEIKINA0A087WXM9 373 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 AQP12BA6NM10 295 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 B2RBV5 119 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 H0YJX3 145 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 J3QRE1 110 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 HSPB6O14558 160 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 SLC31A2O15432 143 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 SERPINA3P01011 423 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 OR2T7P0C7T2 308 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 ELLP55199 621 aaPredicted RBP7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 LINC00315P59091 139 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 DEFA5Q01523 94 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 SCN1BQ07699 218 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 FAM131AQ6UXB0 335 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 APRG1Q8IVJ8 170 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 AQP12AQ8IXF9 295 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 ZNF114Q8NC26 417 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 OR13C9Q8NGT0 318 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 CNIH3Q8TBE1 160 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 DNAJC9Q8WXX5 260 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 CCDC124Q96CT7 223 aaKnown RBP7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 ZNF251Q9BRH9 671 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 ZNF556Q9HAH1 456 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 GAB2Q9UQC2 676 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 LINC00588Q9Y4M8 146 aa7.36□□□□□ -1.23
HDGFL3-204ENST00000563790 TCRBV3S1A0A5B6 114 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 OR4C45A6NMZ5 311 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 A8MWP6 167 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 DEGS1O15121 323 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 FKBP6O75344 327 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 ZNF134P52741 427 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 LSAMPQ13449 338 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 LTC4SQ16873 150 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 TP53I3Q53FA7 332 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 KDM4DQ6B0I6 523 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 ZNF529Q6P280 563 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 ZNF565Q8N9K5 539 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 OR1L1Q8NH94 360 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 NRBF2Q96F24 287 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 CYYR1Q96J86 154 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 MAGT1Q9H0U3 335 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 WARS2Q9UGM6 360 aaKnown RBP7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 ARL2BPQ9Y2Y0 163 aa7.35□□□□□ -1.23
HDGFL3-204ENST00000563790 TSPAN4O14817 238 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 C21orf33P30042 268 aaPredicted RBP7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 POLR2IP36954 125 aaKnown RBP7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 HNRNPA3P51991 378 aaKnown RBP7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 CCL18P55774 89 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 BNIP1Q12981 228 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 KISS1Q15726 138 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 ZNF124Q15973 351 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 PIGYQ3MUY2 71 aa7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 PAN3Q58A45 887 aaKnown RBP7.34□□□□□ -1.23
HDGFL3-204ENST00000563790 TMEM244Q5VVB8 128 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms