RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 RAD51AP1Q96B01 352 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 ABHD14BQ96IU4 210 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 SLC35G5Q96KT7 338 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 TIPINQ9BVW5 301 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 CDCA4Q9BXL8 241 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 BCL2L14Q9BZR8 327 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 DERL2Q9GZP9 239 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 MED28Q9H204 178 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR51I2Q9H344 312 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 MAP1LC3AQ9H492 121 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 SMDT1Q9H4I9 107 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 DUSP21Q9H596 190 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 LRRC19Q9H756 370 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR5V1Q9UGF6 321 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 VPREB3Q9UKI3 123 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 HHLA2Q9UM44 414 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 POLR3HQ9Y535 204 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 OTOFQ9HC10 1997 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 THSD7AQ9UPZ6 1657 aa0.93□□□□□ -2.26
HMGB1P33-201ENST00000563485 LTBP2Q14767 1821 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 ATAD5Q96QE3 1844 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 B4DEV8 164 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 GOLGA6L19H0YKK7 550 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 KCNK1O00180 336 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 TGOLN2O43493 480 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 STK16O75716 305 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 NDUFB2O95178 105 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 APOMO95445 188 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 TYMSP04818 313 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 ZNF708P17019 499 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 NPPCP23582 126 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 RPL12P30050 165 aaKnown RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 ADORA1P30542 326 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 GRPRP30550 384 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 CA7P43166 264 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 RAP1GDS1P52306 607 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 CEBPGP53567 150 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 GABARAPL2P60520 117 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 BTN3A2P78410 334 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 HPCAP84074 193 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 EMX1Q04741 257 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 SMAGPQ0VAQ4 97 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 TMEM267Q0VDI3 215 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR2F1Q13607 317 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 PDGFRLQ15198 375 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 MRPL51Q4U2R6 128 aaKnown RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 CLVS2Q5SYC1 327 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 ZNF660Q6AZW8 331 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 SDIM1Q6ZPB5 146 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 TCF23Q7RTU1 214 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 ZNF550Q7Z398 422 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR11G2Q8NGC1 345 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR10P1Q8NGE3 313 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 ZNRF2Q8NHG8 242 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 CMTM2Q8TAZ6 248 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 Q8WTZ3 238 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 HIST1H2BAQ96A08 127 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 TESCQ96BS2 214 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 TBX5Q99593 518 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 EBNA1BP2Q99848 306 aaKnown RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 MED18Q9BUE0 208 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 HIGD2AQ9BW72 106 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 PARD6GQ9BYG4 376 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 MRPS26Q9BYN8 205 aaKnown RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 C11orf1Q9H5F2 150 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 IL20Q9NYY1 176 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 SLC23A2Q9UGH3 650 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 PSORS1C2Q9UIG4 136 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 GUCA1BQ9UMX6 200 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 SLC22A13Q9Y226 551 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 PCYT1BQ9Y5K3 369 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR51B4Q9Y5P0 310 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 ALG5Q9Y673 324 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 U3KQK5 164 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 COL18A1P39060 1754 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 ADAMTSL1Q8N6G6 1762 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 SNAPC4Q5SXM2 1469 aa0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 CHD2O14647 1828 aaKnown RBP0.92□□□□□ -2.26
HMGB1P33-201ENST00000563485 PTPRJQ12913 1337 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 CACNA1GO43497 2377 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 DCCP43146 1447 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 NCOA1Q15788 1441 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 KMT2EQ8IZD2 1858 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 IGLV10-54A0A075B6I4 117 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 A0A1B0GV50 99 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 GRIFINA4D1Z8 144 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 LINC00862A6NCI5 91 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR6C6A6NF89 314 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 TMEM210A6NLX4 147 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 SLC17A3O00476 420 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 SYNGR2O43760 224 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 SLC25A20O43772 301 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 CDS2O95674 445 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 CALB1P05937 261 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 CTXN2P0C2S0 81 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR4A8P0C604 315 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 OR13C7P0DN81 318 aa0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 HIST1H1EP10412 219 aaKnown RBP0.91□□□□□ -2.26
HMGB1P33-201ENST00000563485 UCHL3P15374 230 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms