RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	GYS2	P54840	703 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	GPR176	Q14439	515 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	HMGN3	Q15651	99 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	TATDN3	Q17R31	274 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	DEFB114	Q30KQ6	69 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	SLC22A6	Q4U2R8	563 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	DDI2	Q5TDH0	399 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	NEK7	Q8TDX7	302 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	TSEN15	Q8WW01	171 aa	Known RBP	6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	LGALS12	Q96DT0	336 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	USMG5	Q96IX5	58 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	TMEM68	Q96MH6	324 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	ALG8	Q9BVK2	526 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	SLC2A8	Q9NY64	477 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	PIPOX	Q9P0Z9	390 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	METTL1	Q9UBP6	276 aa	Known RBP	6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	TP53TG1	Q9Y2A0	90 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	WASHC3	Q9Y3C0	194 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	LRRC42	Q9Y546	428 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	FAT2	Q9NYQ8	4349 aa		6.23	□□□□□ -1.41
CKLF-208	ENST00000563092	CXorf65	A6NEN9	183 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	BMPR1B	O00238	502 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	MAS1	P04201	325 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	IGKV1-16	P04430	117 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	CRYGB	P07316	175 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	GABRB1	P18505	474 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	FUT3	P21217	361 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	KIR2DS2	P43631	304 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	SOX2	P48431	317 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	FXYD3	Q14802	87 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	PLGLA	Q15195	96 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	MRGPRG-AS1	Q2M3A8	158 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	RPL39P5	Q59GN2	51 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	MEDAG	Q5VYS4	303 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	LHFPL3	Q86UP9	236 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	OR5T1	Q8NG75	326 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	OR2AK2	Q8NG84	335 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	GPR148	Q8TDV2	347 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	ABHD5	Q8WTS1	349 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	GALM	Q96C23	342 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	MRPL48	Q96GC5	212 aa	Known RBP	6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	MYCBP	Q99417	103 aa	Predicted RBP	6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	SULT4A1	Q9BR01	284 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	ERVK13-1	Q9NX77	482 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	PEMT	Q9UBM1	199 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	DMRT1	Q9Y5R6	373 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	PEX16	Q9Y5Y5	336 aa		6.22	□□□□□ -1.41
CKLF-208	ENST00000563092	ABCA13	Q86UQ4	5058 aa		6.21	□□□□□ -1.41
CKLF-208	ENST00000563092		A0A0J9YWU9	116 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	IGLV2-23	P01705	113 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	CD2	P06729	351 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	GSTP1	P09211	210 aa	Known RBP	6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	BDKRB2	P30411	391 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	GTF2A1	P52655	376 aa	Predicted RBP	6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	PMS2P11	Q13670	270 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	RPEL1	Q2QD12	228 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	CCDC58	Q4VC31	144 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	XAF1	Q6GPH4	301 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	ZNF880	Q6PDB4	577 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	GLDN	Q6ZMI3	551 aa	Predicted RBP	6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	CDH26	Q8IXH8	852 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	BVES	Q8NE79	360 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	SNAPC3	Q92966	411 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092		Q96M66	194 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	CLCC1	Q96S66	551 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	TSNAX	Q99598	290 aa	Known RBP	6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	ZNF184	Q99676	751 aa	Predicted RBP	6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	GGTLC1	Q9BX51	225 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	PARP12	Q9H0J9	701 aa	Known RBP	6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	MRPS18A	Q9NVS2	196 aa	Known RBP	6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	TECR	Q9NZ01	308 aa	Known RBP	6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	KCNIP1	Q9NZI2	227 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	KLK5	Q9Y337	293 aa	Predicted RBP	6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	DNAH2	Q9P225	4427 aa		6.21	□□□□□ -1.42
CKLF-208	ENST00000563092	TRBV9	A0A0B4J1U6	114 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	TRBV5-5	A0A0J9YX44	114 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	LGALS9	O00182	355 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	PDCD6	O75340	191 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	NDUFB8	O95169	186 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	NAPSA	O96009	420 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	LIMS3	P0CW19	117 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	LIMS4	P0CW20	117 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	CAPG	P40121	348 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	GBX2	P52951	348 aa	Predicted RBP	6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	PPP3R1	P63098	170 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	RIPK1	Q13546	671 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	RPL22L1	Q6P5R6	122 aa	Known RBP	6.2	□□□□□ -1.42
CKLF-208	ENST00000563092		Q6ZWC4	215 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	LYG2	Q86SG7	212 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	ZNF383	Q8NA42	475 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	ADAD2	Q8NCV1	583 aa	Known RBP	6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	GRPEL2	Q8TAA5	225 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	PTX4	Q96A99	478 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	ORAI1	Q96D31	301 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	S100A13	Q99584	98 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	ZNF355P	Q9NSJ1	428 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	STEAP1	Q9UHE8	339 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	ZNF230	Q9UIE0	474 aa	Predicted RBP	6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	DNAH6	Q9C0G6	4158 aa		6.2	□□□□□ -1.42
CKLF-208	ENST00000563092	TRAV8-7	A0A075B6U6	113 aa		6.19	□□□□□ -1.42

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