RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 MOGAT2Q3SYC2 334 aa14□□□□□ -0.17
CMTM3-204ENST00000562357 FOXB2Q5VYV0 432 aa14□□□□□ -0.17
CMTM3-204ENST00000562357 TMEM65Q6PI78 240 aa14□□□□□ -0.17
CMTM3-204ENST00000562357 MRPL41Q8IXM3 137 aaKnown RBP14□□□□□ -0.17
CMTM3-204ENST00000562357 OR8U1Q8NH10 309 aa14□□□□□ -0.17
CMTM3-204ENST00000562357 MRAPQ8TCY5 172 aa14□□□□□ -0.17
CMTM3-204ENST00000562357 RBMXL1Q96E39 390 aaKnown RBP14□□□□□ -0.17
CMTM3-204ENST00000562357 AGMATQ9BSE5 352 aa14□□□□□ -0.17
CMTM3-204ENST00000562357 RDH8Q9NYR8 311 aa14□□□□□ -0.17
CMTM3-204ENST00000562357 RNF150Q9ULK6 438 aa14□□□□□ -0.17
CMTM3-204ENST00000562357 A0A0B4J203 849 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 H0YJW9 148 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 RAB27BO00194 218 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 NDUFA3O95167 84 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 DIRAS3O95661 229 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 TFAP2AP05549 437 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 CNTFRP26992 372 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 RAB25P57735 213 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 GLDNQ6ZMI3 551 aaPredicted RBP13.99□□□□□ -0.17
CMTM3-204ENST00000562357 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.99□□□□□ -0.17
CMTM3-204ENST00000562357 OR5AN1Q8NGI8 311 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 RNF5Q99942 180 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 GINS4Q9BRT9 223 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 KCNK7Q9Y2U2 307 aa13.99□□□□□ -0.17
CMTM3-204ENST00000562357 RBM7Q9Y580 266 aaKnown RBP13.99□□□□□ -0.17
CMTM3-204ENST00000562357 TRAV41A0A0B4J266 112 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 CCL24O00175 119 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 RRHO14718 337 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 ATP6V0E1O15342 81 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 CDX1P47902 265 aaPredicted RBP13.98□□□□□ -0.17
CMTM3-204ENST00000562357 CFHR3Q02985 330 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 CBX3Q13185 183 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 ETV3LQ6ZN32 361 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 C18orf65Q6ZTR6 163 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 RNF152Q8N8N0 203 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 ABHD5Q8WTS1 349 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 RITA1Q96K30 269 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 TSNAXQ99598 290 aaKnown RBP13.98□□□□□ -0.17
CMTM3-204ENST00000562357 AURKAIP1Q9NWT8 199 aaPredicted RBP13.98□□□□□ -0.17
CMTM3-204ENST00000562357 DAPK2Q9UIK4 370 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 RRP15Q9Y3B9 282 aaKnown RBP13.98□□□□□ -0.17
CMTM3-204ENST00000562357 WSB1Q9Y6I7 421 aa13.98□□□□□ -0.17
CMTM3-204ENST00000562357 IGHV7-81A0A0B4J1V7 117 aa13.97□□□□□ -0.17
CMTM3-204ENST00000562357 IGKV1-6A0A0C4DH72 117 aa13.97□□□□□ -0.17
CMTM3-204ENST00000562357 M0R1X1 148 aa13.97□□□□□ -0.17
CMTM3-204ENST00000562357 NEDD8Q15843 81 aa13.97□□□□□ -0.17
CMTM3-204ENST00000562357 KCTD21Q4G0X4 260 aa13.97□□□□□ -0.17
CMTM3-204ENST00000562357 ZNF660Q6AZW8 331 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-204ENST00000562357 LCNL1Q6ZST4 164 aa13.97□□□□□ -0.17
CMTM3-204ENST00000562357 PDPNQ86YL7 162 aa13.97□□□□□ -0.17
CMTM3-204ENST00000562357 DRAXINQ8NBI3 349 aaPredicted RBP13.97□□□□□ -0.17
CMTM3-204ENST00000562357 CABLES2Q9BTV7 478 aa13.97□□□□□ -0.17
CMTM3-204ENST00000562357 FBXL15Q9H469 300 aa13.97□□□□□ -0.17
CMTM3-204ENST00000562357 ZMAT5Q9UDW3 170 aaKnown RBP13.97□□□□□ -0.17
CMTM3-204ENST00000562357 LOC100506127A0A0U1RQW1 187 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 SPDEFO95238 335 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 OR8U9P0C7N5 309 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 GSTT2P0CG29 244 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 GSTT2BP0CG30 244 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 DTYMKP23919 212 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 PSMB8P28062 276 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 PITPNAQ00169 270 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 TMEM267Q0VDI3 215 aaPredicted RBP13.96□□□□□ -0.17
CMTM3-204ENST00000562357 SRSF7Q16629 238 aaKnown RBP eCLIP13.96□□□□□ -0.17
CMTM3-204ENST00000562357 ECSCRQ19T08 205 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 IGSF11Q5DX21 431 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 SFXN4Q6P4A7 337 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 NR2C2APQ86WQ0 139 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 TCTEX1D1Q8N7M0 179 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 C4orf3Q8WVX3 66 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 MAFIPQ8WZ33 124 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 P2RX4Q99571 388 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 TOLLIPQ9H0E2 274 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 OR2D2Q9H210 308 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 OR51E2Q9H255 320 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 VCX3AQ9NNX9 186 aa13.96□□□□□ -0.17
CMTM3-204ENST00000562357 METTL1Q9UBP6 276 aaKnown RBP13.96□□□□□ -0.17
CMTM3-204ENST00000562357 ZNF230Q9UIE0 474 aaPredicted RBP13.96□□□□□ -0.17
CMTM3-204ENST00000562357 TRBV6-7A0A0A0MS04 114 aa13.95□□□□□ -0.18
CMTM3-204ENST00000562357 RPS16P62249 146 aaKnown RBP13.95□□□□□ -0.18
CMTM3-204ENST00000562357 MXD1Q05195 221 aa13.95□□□□□ -0.18
CMTM3-204ENST00000562357 OR5M8Q8NGP6 311 aa13.95□□□□□ -0.18
CMTM3-204ENST00000562357 FLYWCH2Q96CP2 140 aaKnown RBP13.95□□□□□ -0.18
CMTM3-204ENST00000562357 RAX2Q96IS3 184 aa13.95□□□□□ -0.18
CMTM3-204ENST00000562357 DUX3Q96PT4 197 aa13.95□□□□□ -0.18
CMTM3-204ENST00000562357 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.95□□□□□ -0.18
CMTM3-204ENST00000562357 SLC35D1Q9NTN3 355 aa13.95□□□□□ -0.18
CMTM3-204ENST00000562357 G3V318 75 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 CD36P16671 472 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 CD40LGP29965 261 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 SDC2P34741 201 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 GNG2P59768 71 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 CX3CL1P78423 397 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 TAGLNQ01995 201 aaKnown RBP13.94□□□□□ -0.18
CMTM3-204ENST00000562357 TIMM50Q3ZCQ8 353 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 CDNFQ49AH0 187 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 Q6ZS49 121 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 ZNF383Q8NA42 475 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 LGALS14Q8TCE9 139 aa13.94□□□□□ -0.18
CMTM3-204ENST00000562357 FOXA2Q9Y261 457 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms