RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 PLEKHA2Q9HB19 425 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 OR5AC2Q9NZP5 309 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 POMT1Q9Y6A1 747 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 U3KQ87 197 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 KALRNO60229 2985 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 E5RGE8 158 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 K7EPK0 472 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 OVOL3O00110 214 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 RBFOX2O43251 390 aaKnown RBP eCLIP14.08□□□□□ -0.16
HDDC3-206ENST00000561036 IFNA7P01567 189 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 RBP4P02753 201 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 DUTP33316 252 aaKnown RBP14.08□□□□□ -0.16
HDDC3-206ENST00000561036 AVPI1Q5T686 147 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 SLC51BQ86UW2 128 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 FAM71E2Q8N5Q1 922 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 OR8H1Q8NGG4 311 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 C8orf46Q8TAG6 207 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 GPR146Q96CH1 333 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 RRNAD1Q96FB5 475 aaKnown RBP14.08□□□□□ -0.16
HDDC3-206ENST00000561036 ADTRPQ96IZ2 230 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 NSG2Q9Y328 171 aa14.08□□□□□ -0.16
HDDC3-206ENST00000561036 SPTBN1Q01082 2364 aaKnown RBP14.07□□□□□ -0.16
HDDC3-206ENST00000561036 A0A087X0M5 115 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 A0A1B0GX30 115 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 KANTRA0A1W2PQU2 76 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 M0R1X1 148 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 SLC31A2O15432 143 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 BCL2L11O43521 198 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 PITX3O75364 302 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 MMP23AO75900 390 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 MMP9P14780 707 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 CCL3L1P16619 93 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 NKX2-1P43699 371 aaPredicted RBP14.07□□□□□ -0.16
HDDC3-206ENST00000561036 ID3Q02535 119 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 NDUFA5Q16718 116 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 BTNL3Q6UXE8 466 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 SPAG16Q8N0X2 631 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 LINC00311Q8N616 119 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 RNASE11Q8TAA1 199 aaKnown RBP14.07□□□□□ -0.16
HDDC3-206ENST00000561036 ZNF596Q8TC21 504 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 COA4Q9NYJ1 87 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 PRELID3BQ9Y3B1 194 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 LSM5Q9Y4Y9 91 aaKnown RBP14.07□□□□□ -0.16
HDDC3-206ENST00000561036 MMP24Q9Y5R2 645 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 ABCA4P78363 2273 aa14.07□□□□□ -0.16
HDDC3-206ENST00000561036 C17orf98A8MV24 154 aa14.06□□□□□ -0.16
HDDC3-206ENST00000561036 F5H0A9 414 aaPredicted RBP14.06□□□□□ -0.16
HDDC3-206ENST00000561036 PROP1O75360 226 aa14.06□□□□□ -0.16
HDDC3-206ENST00000561036 SCGB1D2O95969 90 aa14.06□□□□□ -0.16
HDDC3-206ENST00000561036 IGKV1-5P01602 117 aa14.06□□□□□ -0.16
HDDC3-206ENST00000561036 PVALBP20472 110 aaPredicted RBP14.06□□□□□ -0.16
HDDC3-206ENST00000561036 THBS3P49746 956 aa14.06□□□□□ -0.16
HDDC3-206ENST00000561036 AKR1C2P52895 323 aa14.06□□□□□ -0.16
HDDC3-206ENST00000561036 AP2S1P53680 142 aaPredicted RBP14.06□□□□□ -0.16
HDDC3-206ENST00000561036 WDR25Q64LD2 544 aaPredicted RBP14.06□□□□□ -0.16
HDDC3-206ENST00000561036 ZNF680Q8NEM1 530 aa14.06□□□□□ -0.16
HDDC3-206ENST00000561036 IGFBPL1Q8WX77 278 aa14.06□□□□□ -0.16
HDDC3-206ENST00000561036 S1PR3Q99500 378 aa14.06□□□□□ -0.16
HDDC3-206ENST00000561036 PATZ1Q9HBE1 687 aaKnown RBP14.06□□□□□ -0.16
HDDC3-206ENST00000561036 ITGB1BP2Q9UKP3 347 aa14.06□□□□□ -0.16
HDDC3-206ENST00000561036 LINC00473A8K010 186 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 LY6HO94772 140 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 RNF224P0DH78 156 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 CDKN1AP38936 164 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 P2RY1P47900 373 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 BRWD1-AS2P59051 145 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 UBA52P62987 128 aaKnown RBP14.05□□□□□ -0.16
HDDC3-206ENST00000561036 GPR157Q5UAW9 335 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 NCR3LG1Q68D85 454 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 FOXRED2Q8IWF2 684 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 ODF3L1Q8IXM7 274 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 LYG1Q8N1E2 194 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 LY6G5BQ8NDX9 201 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 LEAP2Q969E1 77 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 ARPC5LQ9BPX5 153 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 SESN1Q9Y6P5 492 aa14.05□□□□□ -0.16
HDDC3-206ENST00000561036 SAA2-SAA4A0A096LPE2 208 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 A0A0G2JRQ6 117 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 FAM90A26D6RGX4 464 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 TAAR5O14804 337 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 RAMP3O60896 148 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 HPRT1P00492 218 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 P0C879 139 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 SAA2P0DJI9 122 aaPredicted RBP14.04□□□□□ -0.16
HDDC3-206ENST00000561036 HKR1P10072 659 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 GPR6P46095 362 aaPredicted RBP14.04□□□□□ -0.16
HDDC3-206ENST00000561036 ARHGDIBP52566 201 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 RPL39P5Q59GN2 51 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 UTF1Q5T230 341 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 FAM71F2Q6NXP2 309 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 DDB2Q92466 427 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 ZNF251Q9BRH9 671 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 C11orf1Q9H5F2 150 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 CFAP46Q8IYW2 2715 aa14.04□□□□□ -0.16
HDDC3-206ENST00000561036 hCG_1809904A0A1W2PP81 198 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 A0A1W2PPE2 198 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 A0A1W2PR64 198 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 A0A1W2PRV1 198 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 IGHV3-7P01780 117 aa14.03□□□□□ -0.16
HDDC3-206ENST00000561036 IGHV1-8P0DP01 117 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms