RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 FGFRL1Q8N441 504 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 LAMB1P07942 1786 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 TRAV30A0A087WSZ9 112 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 TRBV5-7A0A0A0MS05 114 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 IGKV1D-16P01601 117 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 C8orf88P0DMB2 117 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 HKR1P10072 659 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 PEBP1P30086 187 aaKnown RBP11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 SLC25A47Q6Q0C1 308 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 WFDC3Q8IUB2 231 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 FBLIM1Q8WUP2 373 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 MAP1LC3AQ9H492 121 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 CISD1Q9NZ45 108 aaKnown RBP11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 TMEM56-RWDD3S4R434 201 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 STRCQ7RTU9 1775 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 C5orf67F2Z3F1 127 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 TSPAN2O60636 221 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 SFTPCP11686 197 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 MDKP21741 143 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 CA7P43166 264 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 SRSF5Q13243 272 aaKnown RBP11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 RIPPLY2Q5TAB7 128 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 TCF24Q7RTU0 167 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 SAXO1Q8IYX7 474 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 AQP3Q92482 292 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 METTL26Q96S19 204 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 TRBV9A0A0B4J1U6 114 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 CENPVL1A0A0U1RR11 272 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 C17orf51A8MQB3 221 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 PGLYRP1O75594 196 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 HLA-DRB1P01911 266 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 FAM106CPP0CH98 169 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 SPSB4Q96A44 273 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 ZNF501Q96CX3 271 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 RBKSQ9H477 322 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 UBTD1Q9HAC8 227 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 TNFRSF19Q9NS68 423 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 DMRT1Q9Y5R6 373 aa11.41□□□□□ -0.58
CSPG4P11-201ENST00000560634 SCN7AQ01118 1682 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 A0A1W2PPE3 182 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 OR2H2O95918 312 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 SCTP09683 121 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 AGAP20933 346 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 SLC35B1P78383 322 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 CXorf66Q5JRM2 361 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 DNAJC4Q9NNZ3 241 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 C1QL1O75973 258 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 OR2A4O95047 310 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 RAB9AP51151 201 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 UNC119Q13432 240 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 C16orf92Q96LL3 132 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 OR2A7Q96R45 310 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 MRPL18Q9H0U6 180 aaKnown RBP11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 IGLV1-36A0A0B4J1U3 117 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 AHRRA9YTQ3 701 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 APELAP0DMC3 54 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 CDX1P47902 265 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 GALNT14Q96FL9 552 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 CCL13Q99616 98 aa11.4□□□□□ -0.58
CSPG4P11-201ENST00000560634 A0A0B4J293 547 aa11.4□□□□□ -0.59
CSPG4P11-201ENST00000560634 WNT9BO14905 357 aa11.4□□□□□ -0.59
CSPG4P11-201ENST00000560634 AMY1AP04745 511 aa11.4□□□□□ -0.59
CSPG4P11-201ENST00000560634 HINT1P49773 126 aaPredicted RBP11.4□□□□□ -0.59
CSPG4P11-201ENST00000560634 UCNP55089 124 aa11.4□□□□□ -0.59
CSPG4P11-201ENST00000560634 LINC00518Q8N0U6 118 aa11.4□□□□□ -0.59
CSPG4P11-201ENST00000560634 GPR146Q96CH1 333 aa11.4□□□□□ -0.59
CSPG4P11-201ENST00000560634 SLC25A38Q96DW6 304 aa11.4□□□□□ -0.59
CSPG4P11-201ENST00000560634 IL36RNQ9UBH0 155 aa11.4□□□□□ -0.59
CSPG4P11-201ENST00000560634 IGHV3-21A0A0B4J1V1 117 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 CCL8P80075 99 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 KRTCAP3Q53RY4 240 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 C2orf83Q53S99 150 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 APCDD1LQ8NCL9 501 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 QTRT1Q9BXR0 403 aaKnown RBP11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 TLNRD1Q9H1K6 362 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 SMOC1Q9H4F8 434 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 ADAMTS7Q9UKP4 1686 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 SVILO95425 2214 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 RBFOX2O43251 390 aaKnown RBP eCLIP11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 ERGP11308 486 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 ZNF658BQ4V348 819 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 TM4SF20Q53R12 229 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 UNQ9370/PRO34162Q6UXP9 181 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 OR10S1Q8NGN2 331 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 PMCHL2Q9BQD1 86 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 PARD6GQ9BYG4 376 aaPredicted RBP11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 COX5BP10606 129 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 ZFP36L2P47974 494 aaKnown RBP11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 UCP3P55916 312 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 PAPPA-AS1Q5QFB9 102 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 C1orf185Q5T7R7 199 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 MIC13Q5XKP0 118 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 KCNE5Q9UJ90 142 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 A0A1W2PP11 408 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 MFAP4P55083 255 aa11.39□□□□□ -0.59
CSPG4P11-201ENST00000560634 SIGLEC14Q08ET2 396 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms