RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 YPEL2Q96QA6 119 aa13.53□□□□□ -0.24
TSPAN3-208ENST00000560514 UQCC2Q9BRT2 126 aa13.53□□□□□ -0.24
TSPAN3-208ENST00000560514 SIGLEC8Q9NYZ4 499 aa13.53□□□□□ -0.24
TSPAN3-208ENST00000560514 PIPOXQ9P0Z9 390 aa13.53□□□□□ -0.24
TSPAN3-208ENST00000560514 PEMTQ9UBM1 199 aa13.53□□□□□ -0.24
TSPAN3-208ENST00000560514 METTL1Q9UBP6 276 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-208ENST00000560514 PSORS1C1Q9UIG5 152 aa13.53□□□□□ -0.24
TSPAN3-208ENST00000560514 TRAV8-7A0A075B6U6 113 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 IZUMO1RA6ND01 250 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 OR5H14A6NHG9 310 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 H3BUA1 57 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 SLC22A1O15245 554 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 SC5DO75845 299 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 RBBP9O75884 186 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 CA2P00918 260 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 CSN3P07498 182 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 HTD2P86397 168 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 PMS2P11Q13670 270 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 RPEL1Q2QD12 228 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 FAM71F2Q6NXP2 309 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 LAX1Q8IWV1 398 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 C8orf59Q8N0T1 100 aaPredicted RBP13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 OR13C5Q8NGS8 318 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 OR2K2Q8NGT1 345 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 GRPEL2Q8TAA5 225 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 GALMQ96C23 342 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 ORAI1Q96D31 301 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 STEAP1Q9UHE8 339 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 LRRC42Q9Y546 428 aa13.52□□□□□ -0.25
TSPAN3-208ENST00000560514 NUPR2A6NF83 97 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 RAB29O14966 203 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 FUT3P21217 361 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 AADACP22760 399 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 MAPK3P27361 379 aaPredicted RBP13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 CAPGP40121 348 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 WNT4P56705 351 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 C6orf141Q5SZD1 244 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 JAGN1Q8N5M9 183 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 NKAIN3Q8N8D7 197 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 OR5T1Q8NG75 326 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 MUL1Q969V5 352 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 DERL3Q96Q80 235 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 SRD5A3Q9H8P0 318 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 PEF1Q9UBV8 284 aaKnown RBP13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 WASHC3Q9Y3C0 194 aa13.51□□□□□ -0.25
TSPAN3-208ENST00000560514 UBE2QL1A1L167 161 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 CELP19835 753 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 FXYD3Q14802 87 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 LY6G6FQ5SQ64 297 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 AWAT2Q6E213 333 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 GLDNQ6ZMI3 551 aaPredicted RBP13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 MS4A15Q8N5U1 240 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 DEFB125Q8N687 156 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 NANOGP1Q8N7R0 232 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 KCTD12Q96CX2 325 aaKnown RBP13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 OR14A2Q96R54 314 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 RNF5Q99942 180 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 MBNL3Q9NUK0 354 aaKnown RBP13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 SLC23A1Q9UHI7 598 aa13.5□□□□□ -0.25
TSPAN3-208ENST00000560514 A0A0B4J203 849 aa13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 OR11H12B2RN74 326 aa13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 CASQ2O14958 399 aaPredicted RBP13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 OR2A4O95047 310 aa13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 LAIR2Q6ISS4 152 aa13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 ZFP41Q8N8Y5 198 aa13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 DYNLRB2Q8TF09 96 aa13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 TSNAXQ99598 290 aaKnown RBP13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 SELENOIQ9C0D9 397 aa13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 IFI27L2Q9H2X8 130 aa13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 FKBP14Q9NWM8 211 aa13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 ABRACLQ9P1F3 81 aa13.49□□□□□ -0.25
TSPAN3-208ENST00000560514 A0A1W2PPK0 400 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 H0YJW9 148 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 MYL12BO14950 172 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 ST8SIA5O15466 376 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 AIREO43918 545 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 CD7P09564 240 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 UBBP0CG47 229 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 CT45A6P0DMU7 189 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 CT45A5P0DMU8 189 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 CT45A7P0DMV0 189 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 MGMTP16455 207 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 CPEP16870 476 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 PSG5Q15238 335 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 RCN1Q15293 331 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 RPL39P5Q59GN2 51 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 OGFRL1Q5TC84 451 aaPredicted RBP13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 IL1F10Q8WWZ1 152 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 Q96M66 194 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 ADAM30Q9UKF2 790 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 PCLOQ9Y6V0 5065 aa13.48□□□□□ -0.25
TSPAN3-208ENST00000560514 CRTAPO75718 401 aaPredicted RBP13.47□□□□□ -0.25
TSPAN3-208ENST00000560514 SPDEFO95238 335 aa13.47□□□□□ -0.25
TSPAN3-208ENST00000560514 GNAO1P09471 354 aa13.47□□□□□ -0.25
TSPAN3-208ENST00000560514 CD37P11049 281 aa13.47□□□□□ -0.25
TSPAN3-208ENST00000560514 LGALS7P47929 136 aa13.47□□□□□ -0.25
TSPAN3-208ENST00000560514 GUCA2BQ16661 112 aa13.47□□□□□ -0.25
TSPAN3-208ENST00000560514 CD300EQ496F6 205 aaPredicted RBP13.47□□□□□ -0.25
TSPAN3-208ENST00000560514 C5orf24Q7Z6I8 188 aa13.47□□□□□ -0.25
TSPAN3-208ENST00000560514 RPP25LQ8N5L8 163 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms