RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 H0YJW9 148 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 SCGNO76038 276 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 IGLV1-40P01703 118 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 TFAP2AP05549 437 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 RAB6AP20340 208 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 PPIFP30405 207 aaKnown RBP11.01□□□□□ -0.65
TPM1-223ENST00000560445 CRIP2P52943 208 aaPredicted RBP11.01□□□□□ -0.65
TPM1-223ENST00000560445 GABARAPL2P60520 117 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 ZNF616Q08AN1 781 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 FHL3Q13643 280 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 C2orf76Q3KRA6 126 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 C18orf65Q6ZTR6 163 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 FCGR1BQ92637 280 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 ARHGAP5-AS1Q96IT6 56 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 B9D2Q9BPU9 175 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 PECRQ9BY49 303 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 NDUFB11Q9NX14 153 aa11.01□□□□□ -0.65
TPM1-223ENST00000560445 A0A0A6YYD4 124 aa11□□□□□ -0.65
TPM1-223ENST00000560445 CT45A6P0DMU7 189 aa11□□□□□ -0.65
TPM1-223ENST00000560445 CT45A5P0DMU8 189 aa11□□□□□ -0.65
TPM1-223ENST00000560445 CT45A7P0DMV0 189 aa11□□□□□ -0.65
TPM1-223ENST00000560445 TALDO1P37837 337 aa11□□□□□ -0.65
TPM1-223ENST00000560445 KRTAP10-11P60412 298 aa11□□□□□ -0.65
TPM1-223ENST00000560445 ECSCRQ19T08 205 aa11□□□□□ -0.65
TPM1-223ENST00000560445 RPL39P5Q59GN2 51 aa11□□□□□ -0.65
TPM1-223ENST00000560445 VAX1Q5SQQ9 334 aa11□□□□□ -0.65
TPM1-223ENST00000560445 MINDY2Q8NBR6 621 aa11□□□□□ -0.65
TPM1-223ENST00000560445 OR11H1Q8NG94 326 aa11□□□□□ -0.65
TPM1-223ENST00000560445 OR1N2Q8NGR9 330 aa11□□□□□ -0.65
TPM1-223ENST00000560445 OR10J5Q8NHC4 309 aa11□□□□□ -0.65
TPM1-223ENST00000560445 AGMATQ9BSE5 352 aa11□□□□□ -0.65
TPM1-223ENST00000560445 YTHDF1Q9BYJ9 559 aaKnown RBP11□□□□□ -0.65
TPM1-223ENST00000560445 C11orf54Q9H0W9 315 aaPredicted RBP11□□□□□ -0.65
TPM1-223ENST00000560445 KCNK15Q9H427 330 aa11□□□□□ -0.65
TPM1-223ENST00000560445 SLA2Q9H6Q3 261 aa11□□□□□ -0.65
TPM1-223ENST00000560445 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11□□□□□ -0.65
TPM1-223ENST00000560445 WSB1Q9Y6I7 421 aa11□□□□□ -0.65
TPM1-223ENST00000560445 TRDV1A0A1B0GX56 115 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 WI2-2373I1.2A0A1W2PRP0 233 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 IFITM5A6NNB3 132 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 FOXI3A8MTJ6 420 aaPredicted RBP10.99□□□□□ -0.65
TPM1-223ENST00000560445 FABP7O15540 132 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 NHLRC4P0CG21 123 aaPredicted RBP10.99□□□□□ -0.65
TPM1-223ENST00000560445 RRASP10301 218 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 RAB3BP20337 219 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 LGALS7P47929 136 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 RAB9AP51151 201 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 DEFB136Q30KP8 78 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 AKIRIN2Q53H80 203 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 CD200R1LQ6Q8B3 271 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 ZNF562Q6V9R5 426 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 ZNF429Q86V71 674 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 ZNF491Q8N8L2 437 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 FLYWCH2Q96CP2 140 aaKnown RBP10.99□□□□□ -0.65
TPM1-223ENST00000560445 ABHD14BQ96IU4 210 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 ADTRPQ96IZ2 230 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 DUX3Q96PT4 197 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
TPM1-223ENST00000560445 METTL1Q9UBP6 276 aaKnown RBP10.99□□□□□ -0.65
TPM1-223ENST00000560445 RBM7Q9Y580 266 aaKnown RBP10.99□□□□□ -0.65
TPM1-223ENST00000560445 A0A1W2PN81 502 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 SCTP09683 121 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 CHRNA7P36544 502 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 CLDN12P56749 244 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 RPS16P62249 146 aaKnown RBP10.98□□□□□ -0.65
TPM1-223ENST00000560445 CX3CL1P78423 397 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 SRSF7Q16629 238 aaKnown RBP eCLIP10.98□□□□□ -0.65
TPM1-223ENST00000560445 RTL8BQ17RB0 113 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 ACTBL2Q562R1 376 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 HES5Q5TA89 166 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 PPP1R27Q86WC6 154 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 OR10R2Q8NGX6 335 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 TMEM68Q96MH6 324 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 GFI1Q99684 422 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 GINS4Q9BRT9 223 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 HDHD3Q9BSH5 251 aaPredicted RBP10.98□□□□□ -0.65
TPM1-223ENST00000560445 TOLLIPQ9H0E2 274 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 RDH8Q9NYR8 311 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 OR1A1Q9P1Q5 309 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 GAB2Q9UQC2 676 aa10.98□□□□□ -0.65
TPM1-223ENST00000560445 TMEM272A0A1B0GTI8 110 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 G3V318 75 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 H3BUA1 57 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 I3L521 148 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 M0R1X1 148 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 LDLRAD4O15165 306 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 CREBL2O60519 120 aaPredicted RBP10.97□□□□□ -0.65
TPM1-223ENST00000560445 FCGR3AP08637 254 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 LGALS1P09382 135 aaKnown RBP10.97□□□□□ -0.65
TPM1-223ENST00000560445 HIST1H1DP16402 221 aaKnown RBP10.97□□□□□ -0.65
TPM1-223ENST00000560445 CNTFRP26992 372 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 TMEM50BP56557 158 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 ARFRP1Q13795 201 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 SSX1Q16384 188 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 ZNF260Q3ZCT1 412 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 ARPC1AQ92747 370 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 CABLES2Q9BTV7 478 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 SLC35D1Q9NTN3 355 aa10.97□□□□□ -0.65
TPM1-223ENST00000560445 A0A0G2JLM5 398 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 LINC01619G3V211 115 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms